Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1275 ATGTCATTTACAATGGCCAAGAGTCTGGTGAATCTTCAAAGCCTTTATGTAAGTGAATGTGGGAAGATGACAAGCATCTTCCTCTCTGAACAAGATACAGAGAAGGATATTATGGGTAACTTCTTTCCAGAATTGAAGAATATGAAACTTCGCAATATGAACAGTCTGAGTAAGATATGGAATCCGAAACTCCCATCGGACTACTTTAACAAACTAGAGACTCTAATCATTGAGGAGTGTCACAGACTTGAAAATGCATTGGAGGGAATATTTGGGAGTCTATGCAACTTGAGAGTTAGAAATTGCAGGTCCATGCAAGCAATATTTAATATACGTGAGCAAGTTGGGGATGTAGCTAATAACTTGCAAGATGTTCATTTAGAAACACTCCCAAAATTGGAGCTTGTATGGAAAATGAATAATAAAGACCTCGTAGGGATTCCTAAGTTTAACAATCTGAAGAGGATATGGACTCAAGGTTGTGAGAGCTTGGAATGTATATTTCCATTTTATGTAGCCAAGAATCTTGATAATCTTGAATCTCTTGTGGTTTGTGATTGCGATGGATTGAGTAAAATTGTTGCTGAAAAGGAAGTTACCAACACGGATACAGCCAAATTTAACTTTCCTAAACTAAGCACCATCAAATTTTCACACCTGCCAAGACTTACGAGTTTTTATCCAACGACTTATGATTTATCATGTCCGTTGAATGAGCTGTCCATTGAATTTTGTGACAATCTGGAACCATTCAACAACGGAACCGAGCATGCACAAACAAATCCTGTGCATGCATTCTTTCCTGAAGAGGTAATCAATAACTTGAAGTCCATGCAAATTGAGTTTTGGCACGCAAAGTCACCAAACAGCTATATGGGCAAAGGGAACCATCGAAGGGATAACTTAGAAGAGCTTTCCTTATCTAGATTAATGAATACTGAGATTTTATACTCTTTCCTATATAGAAATCCTAATTTGAAAAGTCTGTCACTGAATACTTGTTTCTTTGAAAAGATTGTGCCTCTAAAGGAAGATACTGAAATTGAAAACTTGGGAGTAGTTCCAAATCTGAAAAGCTTGATGTTGATTGACTTGTTGAATCTCAAAGAGCTAAGCTTTGAACCAGACGTAATTCTTGAAAGGTTAGAGTTCTTGATTTTGAAGAACTGTCGTCTTATGATTACTATAGCACCTTCTTCTGTATCTTTTACTCGCTTGACAAATCTAGAAGTGGTCAATTGTGATCGATTGCAAAGTCTAATGTCAGCATCTACGGCAAAAAGTTTGGCTCAGCTCAACACCATGAAGGTAGTGAAATGTGAATCCCTGATGGAAATAGTAAGAAAGGATGGAGAGAAATCTGACAGAATTGTTTTTCAACACTTGAAAGCCCTAGAGCTTGTTTCACTGAAGAACCTCAAGAGTTTCTGTGTGTCTGATTGTGACTTTGAATTCCCATCTTTGGAGAAATTAGTTGTGAGCGCATGTTATAATATGGATAAATTTTCAAAAACAGTCACCAGCCCAATTTTACAAAATGTACATGTTGTACATGGAAAAGAGAACAAACGATGCTGCTGGGAAGGAGATATAAATGCTACAATAAAAAAAATATTTGAGGAAATGAAATTTTTTGAAGGCATGGAGGAGATAAGCCTTTCGGAACATCAAGAACTACAAGAAACTTGGCAACAAGGAGCTGGTCTGCAAAAGAAACATAGCTGGTTTTATAGTTTGAAAATTTTGAAGCTTGAGAAATGTGTAATTCAACCATTTGCAATTCCATCTAATATTCTTCCTTATTTGAGGAGCTTAAAAGAACTGCAGGTACAAGGTTGCAACAATGTAGAGGTAATTTTTGAGATGAATGCTGAAGAGGGTACTGGATCTACATTTCACTTGCAGAAATTGACTTTACAAGAGCTACCAAAACTTAAGGATGTGTGGGAAAGAAACAGTAAAGGAACCGAGAGCTTTCAAAATCTGAAGCTAGTCAATGTCAGGAACTGTGAAAATCTGCAAACTGTGTTTCCTTTGACCTTGGCAAAATGTCTTAAGAAGCTTGACGAACTTCAAATAATAGATTGTGAAGGATTGCTTGAAATTGTTAGAAAAGAAGAGGACACAGCAGCGGTGTTTGTGTTTCCTTGCTTAACTACACTGACTCTTGCTGACCTGCCAGAGCTCATTTACTTTTACCCAGAATCATTTACTTTGGAATGCTCTGCGTTACATAAAATGATCGTGTGGAATTGTCCAGCGTTGGAGCTATTTGGAAGTCCTAACACACATTCCATTTTCTCTGATCTGAAGCACATTTGCAACCTTGAAGTGCTAGTACTTGGCTGGGAACACACATTGGGGTTAAGGACAGTGTTGGGAGAACCAATGGACAACCTCGAATATTTAAATGATATTCAACTTGTATTTGTTGTTGATGAGAACGGAAGACATGATTTGCCCATTCAAATACTCAAGAAGATGCCCAATTTAACAAAAATGAGTATACGCCATTGCAGTTGCCTCGAGATATTTCAAACTCAAATCCCAGAAATTGTTGAGAAAAGGGTGCTTACACACTTGAAAACATTGAAACTGAATGATGTGTCGAAACTCCAGTCCATTGGGTCAGAGAACTCACCATGGTTAAACGTGATTTGTGACAGTGAAAGGCTTCAACAATTATATGTTCTCGATTGTCCTGATTTGAAAACATTAGTGCATTCTACTCCTTCAGTGTCTTTCAGGTATGTGAAAGAAATATACATAGACAACTGCCAAGATATGAAGTATTTATTCACACTGTCAGCAGTGAATAAGTTAGAGAACCTTGAGTATATATTAGTCAAGAACTGTGAATCAATGGAAGCAATAGTCTTGAAAGATAAGGATGACATTTCAGAAGAGATCAAATTACAGCAGCTAAAGTGCATAGATCTATATATTTTATCGAACTTGGAATGCTTCTATTCAGACAATGACACTTTGCAGTTACCCTCCTTGATACAAGTGGACATATGGATGTGCCCCAAGATGAAGTTTTTCTCTAGAGGAGACATACAACTAAATTCATCATTTAGAGGGATTCAAGCTTTAAACTTCTCAAGTGATGAATTGGTCTTCTATCGTAATCTTAACTCTTCGGTAGAAAAGGTGTTCTTGCAAGAGGAGTTTTTTAATGCCGTGGACACGGACTGTTATGATCTTAATATAAAATGTTACCCGGTTTATGATATTGGTGTGGAAAACAATTTGTTTGCCAATTTGGAAACTATGAAGCTGAAGAACCGCACTCAATCATATGCAATTCCATCTTTTATTCTTGCTCTTTTAAAGAACTTAAAAGAGTTAGAAGTACGAGATAGCGACCAAGTAGAGGCAATTTTTGATATAAATGATGACACTGAGATTAAAGAAACAGAATTCCATTTGAAGATATTGACTTTAAATGGGCTATCAAAGCTGAAGCGTGTATGGGAAAAGGACACTCACAAAATTATCATCTTTCGTAATCTACAAGAGGTTGTTGTTAGTGATTGTGCAAAGCTGCAAACTTTATTTCCTACTTCCCTGGCAAAATGTCTCAAGGATCTTAAAAGGCTTAAAATAGATAACTGTGAAAACTTTCAAGACTTTGTTGAACAGGAGGAAACAACATTTGTAACAGAAAAGTTTGTGTTCCCTTGTCTAGAGGATTTGAATCTCAATGACTTGCCACACGTAACTTGCCCTAAAATGTTCACTCTGGAATTCCCCTCTGTAAAATTCTTATCTGTGAGGGATTGTGATGGGTTAGGGTTATTTCAAAGTGTAGATGATCCCATGGGTGAGGGTACTTCAAGCAGGACACTTCCTCTTATCTCAGACCCAAATGTCATTTCCAACCTGGAGAAACTGACTCTTGATTGGAAACAAATTTTGGCATTAAGCTTATGGTTTAAGTCACTACAATCTACAAAAGGCCTCACAAATTTAAACAGCATTTCCTTGTGTTTCTTTCGTGCCAAGGAGAATGAAATGCCCATGTTGCCTGTTGAAATACTCAAGGCTCCAATTTTAATTGAAATGGATATAAGCAATTGTGAAAGTCTGGAGAATTTCCTTGCTCAAAACCCTAAAATTGGCGAGGAGGAGATGCTGGGACAGTTAACAATCTTGAAGATATGCAATGTGTCCATTACACAGTTCTTTGAGTTAGAGTACTCCTCATGCTTAAACATGTTTGAGAGGCTCCACAAGTTATCTGTTTCCCACTGTCCCCATTTGACAACATTAGGAGTACATTCTACTTCTACAATGTCTTTCTCTTGTCTGAAGGAAGTGAATATATACAAATGTCCTAACTTGAAGTATTTATTTACATCTTCAGCTGACAAAATGTTAATGAACCTTCAGGAGATTAGTGTCATCGAATGCGAATTATTAACAGAAATAGTGGTTAAAGAGGGAGATGCAACTTCTGAAGCCATTGAATTTGAGCGACTCCACACCATTTATCTACAGTCTTTAACAAGTTTAATATGCTTTTATTCTGGGAGAGACACTCTGCAATTACCATCTTTGAAAACTGTGACAATATGGAGTTGCCCCAACATGGAGATTTTCTCCCAAGGAATTGAATCTCTTATGGGAATTACGTTATCCATAGACCTGGAACCAGACGATTTACCCCCTCCACAAGATCTTAACACCAGAATAAAAGGGATCTCACAACGAAAGGAGTTTATTGAAGCAGTGGACAAGGAGTGTTTTTCTGATTATCTTGAACTACAAGAAGATCCACATTGTAACTTTCGCCTGCAAAACCAATGGTTGGGCGATTTGGTTAGTTTGAAGCTTCAGAACTGTACTCTGCCATGTGCAATTCCATCTGCTATTCTTGCTCTTCTAAAGAGCTTAAAAGAGTTGGAAGTACGGGATAGTGCAACAGTAGATGTACTTTTCTATATGAATGACACTGAAACTACACAAATATCATCGCAGTTGAAGATGTTGACCATAGAAGGGCTATCAAAGATGACACGTGTTTGGGAAAAGAAGAAAAATGGAGTTGTCATCTTTCCGAATCTGCAACAGGTCATTGTTAGATGTTGTGAAAACCTGCAAACTCTATTTCCTGCTTCCCTGGCTAAAAATATAAAAAGTCTAAAAAGCCTTGAAATAAAATATTGTGCTAAGTTCCATGAAATTGTAGGAAAAGAAGAAACAGAAGCAAAATTTGTGCTTCCTTGTTTAGAGAAGTTGGATCTTTATTCCTTGCCACAACTCACTTGCTTTCATGCTCAAACATTCATCTTGGAATGCCCAGCCTTAAATAAAATATCTGTGGCGGATTGTGACAAATTGGAGTTATTTCAAAGTGTACATTCCATGGGTGAGGGTACTTCAGTTAACAGAAAGCCTCTTATTTCAAGTCTAGAGGTTATTTCAAACCTGAGAGAATTGGAACTTGATTGGAAACATATTCTGGCATTAAGATCGAGGCTTAGGTCTGAAAAATTTACTGGAGTCTTCAAATTTGTAAATAAAATGAAGCTGTCGTTGGACGGTGATGTGAGTGAGATGCCTATAGTGCTCAATGAAATAGTCCATACAACACCCAACATAATAGAAATGACAATGATTATAGACAATTGCAATAGTACGGAGATTTTCCTCCCCAAAATTATTGAGGATGGGATGCTATTACATTTAAGAATATTGACACTAGCCTTTGTATCTACCATCCGGTCCATCCAGTCAGAGAACTCATCATGGTTAAATACAATCTGTGAGAAGGTTCATGAATTAACAGTCTACCAATGCCCTCATGTTGAAACAATTGGAGTGCATTCTACTTCTACACTGAACTTCTCTTTTTTGACAAAAGTGTGTGCATACCAATGTCCGCAATTGCAGTATTTATTTACATATTCAGTCGCAAAAAAGTTAGTGAGCCTCAAAGAGATCATAGTCATAGAATGTCCATTACTAAAAGAAATAGTGACCAAAGAGAGAGATGAAGATGAACCCAAAGGAGAAGGTCAAGATAAATATGAAAATGAGATGATATTCATGAAGCTTGAGAGTTTGACTCTTGCCTTACTAGACAAATTGGAAAGCTTTTACACGGGGAGTTCCACTTTGAATTTCCCATCCTTGAGAAACGTGTGGGTTGACAAATGCTTCACCACCAAAATTTTCCGTCGTCATGATAAAGTGCCTCCGAAATTTAGGGTTGATATAGATGGAATCCGTTGTAAAGGTGATAAAAAAGCTCTGATCATGCAACAGGTCGAGGAGGAGGCGTCCTGA 6294 0.3735 MSFTMAKSLVNLQSLYVSECGKMTSIFLSEQDTEKDIMGNFFPELKNMKLRNMNSLSKIWNPKLPSDYFNKLETLIIEECHRLENALEGIFGSLCNLRVRNCRSMQAIFNIREQVGDVANNLQDVHLETLPKLELVWKMNNKDLVGIPKFNNLKRIWTQGCESLECIFPFYVAKNLDNLESLVVCDCDGLSKIVAEKEVTNTDTAKFNFPKLSTIKFSHLPRLTSFYPTTYDLSCPLNELSIEFCDNLEPFNNGTEHAQTNPVHAFFPEEVINNLKSMQIEFWHAKSPNSYMGKGNHRRDNLEELSLSRLMNTEILYSFLYRNPNLKSLSLNTCFFEKIVPLKEDTEIENLGVVPNLKSLMLIDLLNLKELSFEPDVILERLEFLILKNCRLMITIAPSSVSFTRLTNLEVVNCDRLQSLMSASTAKSLAQLNTMKVVKCESLMEIVRKDGEKSDRIVFQHLKALELVSLKNLKSFCVSDCDFEFPSLEKLVVSACYNMDKFSKTVTSPILQNVHVVHGKENKRCCWEGDINATIKKIFEEMKFFEGMEEISLSEHQELQETWQQGAGLQKKHSWFYSLKILKLEKCVIQPFAIPSNILPYLRSLKELQVQGCNNVEVIFEMNAEEGTGSTFHLQKLTLQELPKLKDVWERNSKGTESFQNLKLVNVRNCENLQTVFPLTLAKCLKKLDELQIIDCEGLLEIVRKEEDTAAVFVFPCLTTLTLADLPELIYFYPESFTLECSALHKMIVWNCPALELFGSPNTHSIFSDLKHICNLEVLVLGWEHTLGLRTVLGEPMDNLEYLNDIQLVFVVDENGRHDLPIQILKKMPNLTKMSIRHCSCLEIFQTQIPEIVEKRVLTHLKTLKLNDVSKLQSIGSENSPWLNVICDSERLQQLYVLDCPDLKTLVHSTPSVSFRYVKEIYIDNCQDMKYLFTLSAVNKLENLEYILVKNCESMEAIVLKDKDDISEEIKLQQLKCIDLYILSNLECFYSDNDTLQLPSLIQVDIWMCPKMKFFSRGDIQLNSSFRGIQALNFSSDELVFYRNLNSSVEKVFLQEEFFNAVDTDCYDLNIKCYPVYDIGVENNLFANLETMKLKNRTQSYAIPSFILALLKNLKELEVRDSDQVEAIFDINDDTEIKETEFHLKILTLNGLSKLKRVWEKDTHKIIIFRNLQEVVVSDCAKLQTLFPTSLAKCLKDLKRLKIDNCENFQDFVEQEETTFVTEKFVFPCLEDLNLNDLPHVTCPKMFTLEFPSVKFLSVRDCDGLGLFQSVDDPMGEGTSSRTLPLISDPNVISNLEKLTLDWKQILALSLWFKSLQSTKGLTNLNSISLCFFRAKENEMPMLPVEILKAPILIEMDISNCESLENFLAQNPKIGEEEMLGQLTILKICNVSITQFFELEYSSCLNMFERLHKLSVSHCPHLTTLGVHSTSTMSFSCLKEVNIYKCPNLKYLFTSSADKMLMNLQEISVIECELLTEIVVKEGDATSEAIEFERLHTIYLQSLTSLICFYSGRDTLQLPSLKTVTIWSCPNMEIFSQGIESLMGITLSIDLEPDDLPPPQDLNTRIKGISQRKEFIEAVDKECFSDYLELQEDPHCNFRLQNQWLGDLVSLKLQNCTLPCAIPSAILALLKSLKELEVRDSATVDVLFYMNDTETTQISSQLKMLTIEGLSKMTRVWEKKKNGVVIFPNLQQVIVRCCENLQTLFPASLAKNIKSLKSLEIKYCAKFHEIVGKEETEAKFVLPCLEKLDLYSLPQLTCFHAQTFILECPALNKISVADCDKLELFQSVHSMGEGTSVNRKPLISSLEVISNLRELELDWKHILALRSRLRSEKFTGVFKFVNKMKLSLDGDVSEMPIVLNEIVHTTPNIIEMTMIIDNCNSTEIFLPKIIEDGMLLHLRILTLAFVSTIRSIQSENSSWLNTICEKVHELTVYQCPHVETIGVHSTSTLNFSFLTKVCAYQCPQLQYLFTYSVAKKLVSLKEIIVIECPLLKEIVTKERDEDEPKGEGQDKYENEMIFMKLESLTLALLDKLESFYTGSSTLNFPSLRNVWVDKCFTTKIFRRHDKVPPKFRVDIDGIRCKGDKKALIMQQVEEEAS* 2098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1275 2097 SUPERFAMILY L domain-like 1289 1547 - -
Vra9g1275 2097 Gene3D Ribonuclease Inhibitor 1742 2000 IPR032675 -
Vra9g1275 2097 Gene3D Ribonuclease Inhibitor 300 518 IPR032675 -
Vra9g1275 2097 Gene3D Ribonuclease Inhibitor 1427 1549 IPR032675 -
Vra9g1275 2097 Gene3D Ribonuclease Inhibitor 711 936 IPR032675 -
Vra9g1275 2097 Gene3D Ribonuclease Inhibitor 1068 1273 IPR032675 -
Vra9g1275 2097 Gene3D Ribonuclease Inhibitor 1583 1737 IPR032675 -
Vra9g1275 2097 Gene3D Ribonuclease Inhibitor 532 709 IPR032675 -
Vra9g1275 2097 Gene3D Ribonuclease Inhibitor 69 266 IPR032675 -
Vra9g1275 2097 PANTHER RPP4C3 911 1020 - -
Vra9g1275 2097 PANTHER RPP4C3 1677 1787 - -
Vra9g1275 2097 PANTHER RPP4C3 1169 1268 - -
Vra9g1275 2097 PANTHER RPP4C3 150 281 - -
Vra9g1275 2097 PANTHER RPP4C3 651 775 - -
Vra9g1275 2097 PANTHER RPP4C3 1430 1548 - -
Vra9g1275 2097 PANTHER RPP4C3 1942 2072 - -
Vra9g1275 2097 PANTHER RPP4C3 42 120 - -
Vra9g1275 2097 PANTHER RPP4C3 381 534 - -
Vra9g1275 2097 SUPERFAMILY RNI-like 1659 1996 - -
Vra9g1275 2097 SUPERFAMILY L domain-like 277 697 - -
Vra9g1275 2097 PANTHER - 1430 1548 - -
Vra9g1275 2097 PANTHER - 1942 2072 - -
Vra9g1275 2097 PANTHER - 150 281 - -
Vra9g1275 2097 PANTHER - 42 120 - -
Vra9g1275 2097 PANTHER - 381 534 - -
Vra9g1275 2097 PANTHER - 911 1020 - -
Vra9g1275 2097 PANTHER - 1169 1268 - -
Vra9g1275 2097 PANTHER - 1677 1787 - -
Vra9g1275 2097 PANTHER - 651 775 - -
Vra9g1275 2097 SUPERFAMILY RNI-like 882 1266 - -
Vra9g1275 2097 SUPERFAMILY RNI-like 7 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1275 Vra-Chr9 20651601 20665346 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1275 - - vra:106773505 4163.99