Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1274 ATGANAAAAATCATTGCAGAATTGGAAAAGCCAAGTGTTAGAATGATTGGTCTTCATGGGTTAAGTGGCATGGGCAAGACTACTTTAGTCAAAGAAGTTGTTAAAGTAGCCTTAGAAGCTAAGAAGATCGACGTAGTGACCATGGCAAGCGTGACAAGAAATCCTGACATAAGAAAAATCCAGGGACAAATTGCTGACTCGTTGGGGATTATATTGGATGAGGAAAGTGANGTTGCAAGAGCTGCTAGAATACANAAGAGATTAAAGAANGAGAAGGAGAAGACACTTATAATCCTAGATGATCTTTGGGAAAAGGTGGACTTCAATATGCTTGGGATCCCATATGAAATACATAATCATACAGGCCTAAAAAANGTTAAAGAAGGAAAATCCGTCCATGTTGATAGCTTGATGAATCAAAAGGAAGGAAGTCCTAAAGAACCCCATGGTGCTTCGNATGAGTTGAAGACTGAAAAAACTCGTAGTCAGTACAAAGGGTGCAAAGTTTTGTTGATTTCTGAAAGCAAAACGGTATTATTAACTCAAATGGGAAGGAAAGAAAACTGTGTTTTCTGTTTGGAAGCCTTGAAGGAGAAGGAAACAGAGATGCTGTTCAAGAAAATGGCTGGAATGGGAGACTATAATTCTAAATTTCAGAAGTTAGGAGCTCAAATTGCGAACAAGTGTAATGGGTTGCCAATGACAATTGTTACAACTGCAAGGGCCTTAAAAAAACAGAGCCCCTTTGTATGGGAGGATATTCTTCGAAAACTTGAATGGCAGAAGTTAACTGGAGCACCTGAGCTGTCAACAAAGTTGAGTTATGATCTTTTAGAAGACGATGAACTCAAGTATACTTTCTTACTTTGTGCTCGCATGGGTCATGATGCATTGATTATGGACTTGGTCAAATATTGCATTGGTTTGGGGTTCCTTCAAGGGATCTACACAGTGAGAGAAACCAGAGACAGAGTTTGTACCCTTGTTGAAAAGCTGAAAGAATCGGGTTTGTTGTCTGACAGCTATTCAAGGGATCAATTTACCATGCAAAATATTATTCGCAATGCAGCTTTGTCAATAGCAAATAAGGAAAAACATTTATTTACAGTGACAAAGGGAAAGATAGATGAATGGCCCGAGAAACTTGACGAGTATGCTGCTATTTCCTTGCATCATTGTAACTTCATTGAGGGGTTTCCTAGGAGAATAAAGTACCCAGGACTTAGGGTCTTCCATTTCAACAATAATGATCCACATCTCAAAGTACCCACAAATTTTTTTAAAGGAATGAAGGGACTCAAAGTGTTGATATTGACTGGCATTCATCTCTCCCTCTTAGAATCATCAGTTTCATCCTTGATAGAACTCAGAATGCTTTGTTTGGAGCAATGCACGCTAGAAGAATTATCCATCATAGGAATGCTGAAAAAGTTAAGAATTCTTAGTTTTTCAAGATCTGATATCGAAAAATTGCCAGTTGAATTGCAAAAGTTGAAAAAACTACAAATTTTTGACTTAAGTAATTGCTCTAAACTTAAAGAAATTCCATCAGGTGTCATTTCAAACTTGGTATGCTTGGAGGAGTTGTATATGAGAAATACCTTGATTCATTGGGAGAAGGAAGAACTTACACGTCAAAGTAAAATAGGCCTTCTTTCTGAGTTGAAACACTTGAGCCAATTGACAACTCTAGACATACAAATCCCAGAGGTTTCCCATTTGCCGAAAACCTTGTTCTTTGACAAGTTATATAGTTACAAGATTGTTATTGGAGATTTGAGTGCACTCTTAGAGACTGATTTCAAGATTCCAGAGATGTATGAAACATCTAGATTTTTAGCAATACGATTGAAAGATGGGTTTGACATTCACTCTCTAAAGGGGGTCAAAATGTTGTTTGAAGGAGTTCAAAGTTTGCTTTTGGAAGAACTTAATACTGTCCATGATTTATTTTATAGATTGAATTTAAAGGGTTTTCCATATCTAAAACATCTGTTTATTGTAAATAATTTCACCATTCAATCTCTCATCTATCCGAAAGACAGACAACAGTCACAACACCCTGAGAAAGCGTTTCCTAAACTGGAGTCATTGCATCTCTATAATCTTAAGAAGATAAAAAATATATGCTCCTGTAAACTTTCTGAACCCTCCTTTGGTAAACTGAAAGTCATCAAGATCAATCTCTGTGGTCAATTGAAGAGTGTGTTCTCAATTTCTATGGTAAATCTTTTAACTGCTCTTGAAACAATTGAAGTTTCTGAGTGTTACTCTTTGACGGAGATTGTCTCTGTGGAAGAATCACAAAGCAATACTCAGGAATCCAAACTGGTGTTCCCTAAATTACTGTATTTGAAGCTACAATCTTTGTCTCTGTGTGGTAAATTTTATTCCATAACGGAGGAAAAACTCTTCAATGAAAAGGTTGATGTTTCAAAATTAGAGAGAATGGAGTTGTCCTCAATTCCCATTACCGAGATATGGAATTATCATCATTCAAACAGGTCCTTGTTTAAAAATTTGACACATTTGGATGTTAATGGTTGTTGGAAACTAGAACATCTAATATCTTTTTCAATGGCCAAGTGTCTGGGAAGCCTTCAAAGCCTTTTTGTAAGTGAATGCGGAAATATGAAAGGCATCTTTCCTGATAGCATGCAGATGGAGGGTGACATCTTTCCAAAATTGAAGAATATCAAATTAAGTAGCATGAAGAGTTTGCGCAAGATATGGCCCTCAGACCTCCCTTCAAAATCCTTTAGCAAACTAGACACACTAATCATTGAGAAGTGTGATAAATTAGTCAGTGTTTTTCCTCATTATTATGAGGGAATATTTCACAGTCTATGCAACCTGACTGTTACAAAATGCACGCAAATGCAAACAATATTTGACACATATGATAAAATGCGTTATGTTGGGGTTGTTAGCTTGCAAGATCTTCATTTAGAAATACTCCCAAATTTGAAGCATGTATGGAAATTGGAAAAGGGTAAAGGAGGGATTCTTGAGTTGAAGAATCTGCAAAAGATAATGGTTCAAAATTGTTACTGCTTGGAAAATATATTTCCATTTTCTGTAGCTGAGAATCTTGGTAATCTTGAATACCTTGTGGTGAGTTATTGTGTTGAATTGAGGGAAATTGTGGCCAAAAGTGCGGCTGTCAACACTGCTAAATTATTATTCAAGTTCCCTAAACTAAGAAGCATTAAATTTTCAGTCCTACCACGACTTACAAGTTTCTATCCAGGAGCTTTTCAACTGTGTTGTCCAACATTAAATGACCTATCTATTGAATATTGTGACTTGCTGGAACCATTCCAGAAAGAAACTGTAGATGTAGAAGGAAAATGTGTCCTCTTTTCTGAAGAGGTACTCAACAAGTTGAAGTCGATGCAAATTGAGTCTTGGCATGCAAAGTCACAAAACAGTTGTATGAATGAAGGGAATCATCGAAGAGATAGTTTAGAAGAGCTTTGTTTATCTAGATTATCGGATACTGAGATCTTATATTCTTTTCTCCATAGCAACCCAAATCTGGAAAGCCTATCCTTGAGTGATTGTTTATTTGAAGAGATAGTGCCTCTTGAAAAAAATACAAAAATTGAAACACTGGGAGTAGTTCCAAAGCTGAAAAACTTGAAGTTGATAAACTGTAAACTTAAAGATCTGGGCTTTGAAGAAGACATAATTCTTAGAAGGGTAGAACTCTTGCTTTTAAAAAGATGTCCTTGCATGACAACAGTGGTGTCTTCTTCGACATCTCTCAGTAGCTTAGTGAATCTTGAAGTTGATAACTGTGATGGATTAGAAAATCTAATGTCACCATCTACTGCAGAAAGCTTAGGTCAACTCAACACCATGAAGGTAACCAAATGTAAAAATCTAATGGAAATAGTAGGAAAAGATGCAGGGAATGCTAGCAAAGTTGTTTTTAAAAAATTGAAGACCCTGGAGCTTGTTTCTCTAAAGAAACTCCAGAGCTTTTGTAACTCTGAGAGTTGTGAATTTGAGTTTCCTTCGTTGGAAAGACTAGTGGTGAGTGCATGTTATAATATGAAAAAATTTTCTGACAAGGTCACGAGACGAAGCACACCCATTTTACAAAATGTATATGCGATACTTGAACAAGAGAAGAAAAGATACTGCTGGGAAGGTGACTTAAATGCCACAATACATAAAATGTTTCTGGATAAGAAATTTTTTGAAGGCATGAACATGATGAGTTTCTCTGATGACGGAAAGCTAAAACAAGAAATGATGAGTTTATCTGATCACCTAGAACTAAATCGAGCCTGGCTAGGTGGTGAAGTTGATCCCCAAAGTATTCATAGTTGGTTCTACAGTTTGAAAGTTTTGAAGCTTGAGAAGTGTGAAATTCAGCAATGTGCAATTCCATCTAATATTCTTCCTTATTTGAAAAACTTAAATGAACTGATGGTGCAAGATTGCAACAATGTAGAAGTAGTTTTTGAGATGAATGTCACACAGGGAACAGGAACAACATTCCAATTGCAGAAATTAACTCTAAATCGACTATCAAAGCTTAAGAATGTGTGGAAAGGGAATGGTGAAGAAACTCGCAGCTTTCAAAATCTGCGGGAAGTGGCTGTTCTAGAGTGTCACATGATGCAAACTTTGTTTCCTGCAGCCCTGGTAAAAAATCTTAAGAAGCTTCACACACTTATGATTGGACGTAGTTGGGGGTTAGAAATTGTTGGAAAGGAAGACAATGCAGCATTAGCAACACAGAATTTGGTGTTTCCTTGTTTAACTACATTAGTTCTTGTTGACCTGCCAGAGCTCAATTACCTTTATCCAGAACCATTCACCGTGGAATGCCCCGTGTTAAAATTTTTAAGAGTGTTAGATTGTCCGAAGTTGGATCTGTTTCCTCGTTTCTTAGATCTAAAAACGGTCGTTGCCAACCTTGAGCAATTGGTACTCGAAGGGAAACACAGTTTGGTGTTAGAGTCAAGTTTACAAGATCTTGAGTACTGCTTTGAGGATTTAAATTCTATTTCTCTGCGATTTGATGTTGATGAAAATGAAAAGTCTAATTTGCCTATTCAAATACTCCAAAGGGTGCCAAATTTACATGAAATGAGTATAAGTTCTTGCCATTGCCTAGACGCATTCCGCACTGAAATTTCTGAAATGAATAAAAAGGTGATGCTTACAGACTTGAAACGTTTGGATCTGAATGATGTATGGGAGCTCAAGTCTATTGGATCGGGGGATGTTCCATGGTTAGACATGATTTGTAAGAAGCTCCATAGATTATATGTTGCCAATTGTCCTCGTTTCATGGCAGTAATGCATTCCCCTTCTGCACAGTTTTTCTCCTGTTTGAAAGTGTTGTCTGTATTCAATTGTCAAAGATTGGAGTATTTATTCACATCATCAGCAGCAGAAAAGTTGACTCAGCTTGAGCGTATCCATCTGTACAAATGTAGATCGATAAAAGAAATAGTGGCAAAAGAGCAAGGTGAAACAACTTCAGGAGGGTTCAAATTGCAGCAGCTACGCTGCGTATCTTTGTCTTATTTATCAAGCTTGGAATGTTTTTATTCTGGAAATCGCACTTTGCAGTTACCCTCTTTGATAGAAGTTCGCATAATTGAGTGCCCCAAGATGGAAATTTTCTGTAAAGGATCAATGGGTCCCAATTTGTGTAAAGAAATTAGAACTTCCTATACCTCAAATAATGGATTGGTCATCGTGCATGATGATCTTAACTCCACTGTCAAAAAGGTGTTTCGACAACAGAATCATATAGTTTTCGGGGATTCTCGTATGTTGCAAGACATATGGAAATCAGTGACACTCCCCGAAGGGTATTTCCACAATTTAACTTCTATGGTAGTTGAAGGTTGTGAATTTTTATCAGATGCAATACTACCTTCCCATTTACTTCATTTACATCAACCATCTACCTCTACCACATTTGACCCCAACAATGTCGTCAGCAAAGATGCTTATGATTCACTTCTAGCCAGATTTGAAAATCTGGAAAATCTGGTTAGGACATTGGTTCCTCAGCAAGGACATACCGCCCCATCATCATCCCAGCAGCCTCCTTTCCAGACCACAATTGTGCAAGACGAAGATAGTGATGATTCTGATGATCGTGATGATCCTAATCCTGATGCTGACGTAGCTTGCGAGTCAGAAGCTTCTTCTAATGAGTTGAAAAAAGAACTTGATTTGCTGGGTAAAAAGTTTGGATGCAGTTCATCCATGACAAATAACATAATTAGTGATGGAAGTGAACTACGATATGACAATCCGGTCATCGGTACAATACCCAAAATTGTTGAGGCAAGTGTTGATGTACTTGTTCGTAGCCCTGTAGCAGTGAAGCGAAAAGGATGA 6375 0.3724 MXKIIAELEKPSVRMIGLHGLSGMGKTTLVKEVVKVALEAKKIDVVTMASVTRNPDIRKIQGQIADSLGIILDEESXVARAARIXKRLKXEKEKTLIILDDLWEKVDFNMLGIPYEIHNHTGLKXVKEGKSVHVDSLMNQKEGSPKEPHGASXELKTEKTRSQYKGCKVLLISESKTVLLTQMGRKENCVFCLEALKEKETEMLFKKMAGMGDYNSKFQKLGAQIANKCNGLPMTIVTTARALKKQSPFVWEDILRKLEWQKLTGAPELSTKLSYDLLEDDELKYTFLLCARMGHDALIMDLVKYCIGLGFLQGIYTVRETRDRVCTLVEKLKESGLLSDSYSRDQFTMQNIIRNAALSIANKEKHLFTVTKGKIDEWPEKLDEYAAISLHHCNFIEGFPRRIKYPGLRVFHFNNNDPHLKVPTNFFKGMKGLKVLILTGIHLSLLESSVSSLIELRMLCLEQCTLEELSIIGMLKKLRILSFSRSDIEKLPVELQKLKKLQIFDLSNCSKLKEIPSGVISNLVCLEELYMRNTLIHWEKEELTRQSKIGLLSELKHLSQLTTLDIQIPEVSHLPKTLFFDKLYSYKIVIGDLSALLETDFKIPEMYETSRFLAIRLKDGFDIHSLKGVKMLFEGVQSLLLEELNTVHDLFYRLNLKGFPYLKHLFIVNNFTIQSLIYPKDRQQSQHPEKAFPKLESLHLYNLKKIKNICSCKLSEPSFGKLKVIKINLCGQLKSVFSISMVNLLTALETIEVSECYSLTEIVSVEESQSNTQESKLVFPKLLYLKLQSLSLCGKFYSITEEKLFNEKVDVSKLERMELSSIPITEIWNYHHSNRSLFKNLTHLDVNGCWKLEHLISFSMAKCLGSLQSLFVSECGNMKGIFPDSMQMEGDIFPKLKNIKLSSMKSLRKIWPSDLPSKSFSKLDTLIIEKCDKLVSVFPHYYEGIFHSLCNLTVTKCTQMQTIFDTYDKMRYVGVVSLQDLHLEILPNLKHVWKLEKGKGGILELKNLQKIMVQNCYCLENIFPFSVAENLGNLEYLVVSYCVELREIVAKSAAVNTAKLLFKFPKLRSIKFSVLPRLTSFYPGAFQLCCPTLNDLSIEYCDLLEPFQKETVDVEGKCVLFSEEVLNKLKSMQIESWHAKSQNSCMNEGNHRRDSLEELCLSRLSDTEILYSFLHSNPNLESLSLSDCLFEEIVPLEKNTKIETLGVVPKLKNLKLINCKLKDLGFEEDIILRRVELLLLKRCPCMTTVVSSSTSLSSLVNLEVDNCDGLENLMSPSTAESLGQLNTMKVTKCKNLMEIVGKDAGNASKVVFKKLKTLELVSLKKLQSFCNSESCEFEFPSLERLVVSACYNMKKFSDKVTRRSTPILQNVYAILEQEKKRYCWEGDLNATIHKMFLDKKFFEGMNMMSFSDDGKLKQEMMSLSDHLELNRAWLGGEVDPQSIHSWFYSLKVLKLEKCEIQQCAIPSNILPYLKNLNELMVQDCNNVEVVFEMNVTQGTGTTFQLQKLTLNRLSKLKNVWKGNGEETRSFQNLREVAVLECHMMQTLFPAALVKNLKKLHTLMIGRSWGLEIVGKEDNAALATQNLVFPCLTTLVLVDLPELNYLYPEPFTVECPVLKFLRVLDCPKLDLFPRFLDLKTVVANLEQLVLEGKHSLVLESSLQDLEYCFEDLNSISLRFDVDENEKSNLPIQILQRVPNLHEMSISSCHCLDAFRTEISEMNKKVMLTDLKRLDLNDVWELKSIGSGDVPWLDMICKKLHRLYVANCPRFMAVMHSPSAQFFSCLKVLSVFNCQRLEYLFTSSAAEKLTQLERIHLYKCRSIKEIVAKEQGETTSGGFKLQQLRCVSLSYLSSLECFYSGNRTLQLPSLIEVRIIECPKMEIFCKGSMGPNLCKEIRTSYTSNNGLVIVHDDLNSTVKKVFRQQNHIVFGDSRMLQDIWKSVTLPEGYFHNLTSMVVEGCEFLSDAILPSHLLHLHQPSTSTTFDPNNVVSKDAYDSLLARFENLENLVRTLVPQQGHTAPSSSQQPPFQTTIVQDEDSDDSDDRDDPNPDADVACESEASSNELKKELDLLGKKFGCSSSMTNNIISDGSELRYDNPVIGTIPKIVEASVDVLVRSPVAVKRKG* 2125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1274 2124 SUPERFAMILY L domain-like 349 763 - -
Vra9g1274 2124 MobiDBLite consensus disorder prediction 2012 2034 - -
Vra9g1274 2124 PANTHER RPP4C4 1 798 - -
Vra9g1274 2124 PANTHER RPP4C4 804 1921 - -
Vra9g1274 2124 Coils Coil 78 84 - -
Vra9g1274 2124 SUPERFAMILY L domain-like 1442 1653 - -
Vra9g1274 2124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 290 IPR027417 -
Vra9g1274 2124 SUPERFAMILY RNI-like 1154 1355 - -
Vra9g1274 2124 MobiDBLite consensus disorder prediction 2012 2054 - -
Vra9g1274 2124 Gene3D Ribonuclease Inhibitor 365 778 IPR032675 -
Vra9g1274 2124 SUPERFAMILY L domain-like 781 1105 - -
Vra9g1274 2124 Coils Coil 91 91 - -
Vra9g1274 2124 Coils Coil 71 76 - -
Vra9g1274 2124 PANTHER - 1 798 - -
Vra9g1274 2124 PANTHER - 804 1921 - -
Vra9g1274 2124 MobiDBLite consensus disorder prediction 137 157 - -
Vra9g1274 2124 Gene3D Ribonuclease Inhibitor 1149 1379 IPR032675 -
Vra9g1274 2124 Gene3D Ribonuclease Inhibitor 1677 1976 IPR032675 -
Vra9g1274 2124 Gene3D - 1 188 IPR027417 -
Vra9g1274 2124 SUPERFAMILY L domain-like 1588 1885 - -
Vra9g1274 2124 Gene3D Ribonuclease Inhibitor 779 944 IPR032675 -
Vra9g1274 2124 Gene3D Ribonuclease Inhibitor 1419 1641 IPR032675 -
Vra9g1274 2124 Gene3D Ribonuclease Inhibitor 945 1141 IPR032675 -
Vra9g1274 2124 PRINTS Disease resistance protein signature 15 30 - -
Vra9g1274 2124 PRINTS Disease resistance protein signature 89 103 - -
Vra9g1274 2124 PRINTS Disease resistance protein signature 229 243 - -
Vra9g1274 2124 PRINTS Disease resistance protein signature 496 512 - -
Vra9g1274 2124 Gene3D - 195 279 IPR042197 -
Vra9g1274 2124 Coils Coil 86 89 - -
Vra9g1274 2124 Pfam NB-ARC domain 162 264 IPR002182 GO:0043531
Vra9g1274 2124 Pfam NB-ARC domain 3 116 IPR002182 GO:0043531
Vra9g1274 2124 MobiDBLite consensus disorder prediction 2035 2049 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1274 Vra-Chr9 20601854 20636650 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1274 - - vra:106778986 3843.51