Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1270 ATGGCCGTCGTTGGCGTTCTCGCGCTACAAGGATCGTTCAACGAGCACATGGCTGCTCTTAGAAGGTTAGGGGTGAAAGGTGTGGAGATTCGAAAACCGGAGCAGCTTCACACCATTTCATCCCTCATCATCCCCGGAGGAGAAAGCACCACCATGGCTAAGCTCGCTGAGTATCATAATTTGTTTCCTGCTTTGAGAGAGTTTGTAAAAATGGGAAAGCCTGTTTGGGGAACCTGTGCAGGGCTTATATTCTTGGCAAACAAAGCTATAGGACAGAAGACTGGTGGACAAGATTTGGTCGGGGGACTTGATTGTACTGTGCATAGAAATTTCTTTGGAAGCCAGATTCAAAGCTTTGAGGCAGAGCTTTCAGTGCCACAGCTTGCCTCCCAGGAAGGTGGTCCTGAAACATTTCGTGGAGTTTTTATTCGTGCACCGGCAATTCTTGAAGCAGGGCCGGAAGTTCAAGTGCTTGCTGATTATCCCGTATCTTCTGATAAATTGTTGAGTTTTGACACTTCTACTGGAGACAAAAAGGAGAATGCTGAGGAAGAAAGTAAGGTTATTGTTGCTGTGAGACAAGGGAACATACTAGGGACTGCTTTCCATCCTGAATTGACAGCTGATACTCGATGGCATAGTTATTTTTTGAAAATGTCAAACGAGACTGGAGAAGAGGCTTCCTTAAGTAACCTTGTTCCTGCACAAGTCACCACAAGTCTCTATCAACTCACCCGCAGTGACCTTCCTATCTTTCAATAG 762 0.458 MAVVGVLALQGSFNEHMAALRRLGVKGVEIRKPEQLHTISSLIIPGGESTTMAKLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKAIGQKTGGQDLVGGLDCTVHRNFFGSQIQSFEAELSVPQLASQEGGPETFRGVFIRAPAILEAGPEVQVLADYPVSSDKLLSFDTSTGDKKENAEEESKVIVAVRQGNILGTAFHPELTADTRWHSYFLKMSNETGEEASLSNLVPAQVTTSLYQLTRSDLPIFQ* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1270 253 Gene3D - 1 230 IPR029062 -
Vra9g1270 253 CDD GATase1_PB 4 217 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vra9g1270 253 PANTHER PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO 2 252 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vra9g1270 253 PIRSF Glut_amidoT_SNO 1 226 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vra9g1270 253 Hamap Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 219 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vra9g1270 253 PANTHER - 2 252 - -
Vra9g1270 253 ProSitePatterns PdxT/SNO family family signature. 41 51 IPR021196 -
Vra9g1270 253 ProSiteProfiles PdxT/SNO family profile. 3 221 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vra9g1270 253 TIGRFAM PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 4 161 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vra9g1270 253 Pfam SNO glutamine amidotransferase family 6 220 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vra9g1270 253 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 3 226 - -
Vra9g1270 253 SUPERFAMILY Class I glutamine amidotransferase-like 3 219 IPR029062 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1270 K08681 - gmx:100786227 439.113