Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1266 ATGGTAGAATCCGAGGGGAGAGCCACGCTGACGTGGCGCAAAATCCCGGACCTCAAATCCTCCCGCAACGACGTCGTTACTCCACTCCGAGACGGCGTCGTCGTTCTCCGCCTCGCACCCGGCAGTGGCACACGCTGTAATTTCGCGAGCGTGTCAGTGGCAGAAAGGAAATTCGACAAGGAATTCTCGCCGACTGCGGCTCAGCTTCTGCAGCACCCGCTCGCGATGGGGGCATTGGTGCCTAGAGACGCCGCTCTGTTCCTCGCTGGCGCTATCGCCGGCGCCGCCGCGAAATCCGTCACCGCCCCCCTGGACCGCATCAAGCTTCTCATGCAGACTCACGGCGTGCGAGTTGGACAAGAAAGTGTCAAGAGAGCGATTGGTTTCATTGAGGCTATGACTGTGATAGGGAAGGAAGAAGGCATTAGAGGTTATTGGAAGGGCAATCTCCCCCAGGTGATTCGAGTTATACCTTACAGTGCTGTCCAGCTTTTTGCTTATGAAATTTACAAGAAAATATTCAAGGGAAAGGATGGTGAGCTCTCTGTTGTGGGAAGACTTGCAGCAGGTGCTTTTGCTGGCATGACATCAACTTTTATCACTTACCCGTTAGATGTCCTAAGATTACGATTAGCTGTTGAACCTGGTTATCGAACAATGTCAGAGGTTGCCTTGGGCATGCTAAGAGAGGAAGGATTTGCATCTTTTTACTATGGCCTTGGGCCTTCTCTCATTGGAATTGCTCCATATATTGCAGTGAATTTCTGTGTTTTTGATTTATTAAAGAAGTCATTGCCAGAGAAATATCAGAAGAGAACTGAAACTTCTTTACTCACTGCTGTTATTTCATCATCTCTTGCCACACTCACATGCTATCCTTTGGACACAGTGCGAAGACAAATGCAATTGAAGGGTACACCTTATAAGTCTGTATTAGATGCCATTTCAGGTATTGTGGAAAGGGATGGAGTTATTGGTTTGTATCGGGGATTTGTGCCAAATGCTTTGAAAAACCTACCAAATAGCAGCATCAGGCTTACTACATATGACATTGTTAAACGCCTAATTGCAGCCAGTGAGAAAGAGTTTCAAACAATTACCGAGGAAAACCGCAACAAAAAGAAACCTCAATAG 1134 0.4762 MVESEGRATLTWRKIPDLKSSRNDVVTPLRDGVVVLRLAPGSGTRCNFASVSVAERKFDKEFSPTAAQLLQHPLAMGALVPRDAALFLAGAIAGAAAKSVTAPLDRIKLLMQTHGVRVGQESVKRAIGFIEAMTVIGKEEGIRGYWKGNLPQVIRVIPYSAVQLFAYEIYKKIFKGKDGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEVALGMLREEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLLTAVISSSLATLTCYPLDTVRRQMQLKGTPYKSVLDAISGIVERDGVIGLYRGFVPNALKNLPNSSIRLTTYDIVKRLIAASEKEFQTITEENRNKKKPQ* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1266 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 81 173 IPR018108 -
Vra9g1266 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 181 264 IPR018108 -
Vra9g1266 377 PRINTS Mitochondrial carrier protein signature 86 99 IPR002067 GO:0055085
Vra9g1266 377 PRINTS Mitochondrial carrier protein signature 99 113 IPR002067 GO:0055085
Vra9g1266 377 PRINTS Mitochondrial carrier protein signature 148 168 IPR002067 GO:0055085
Vra9g1266 377 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085
Vra9g1266 377 PRINTS Mitochondrial carrier protein signature 237 255 IPR002067 GO:0055085
Vra9g1266 377 PRINTS Mitochondrial carrier protein signature 280 302 IPR002067 GO:0055085
Vra9g1266 377 PANTHER ADP/ATP CARRIER PROTEIN 7 368 - -
Vra9g1266 377 Gene3D Mitochondrial carrier domain 84 356 IPR023395 -
Vra9g1266 377 SUPERFAMILY Mitochondrial carrier 85 351 IPR023395 -
Vra9g1266 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 355 IPR018108 -
Vra9g1266 377 PANTHER SOLUTE CARRIER FAMILY 25 7 368 - -
Vra9g1266 377 Pfam Mitochondrial carrier protein 86 176 IPR018108 -
Vra9g1266 377 Pfam Mitochondrial carrier protein 275 357 IPR018108 -
Vra9g1266 377 Pfam Mitochondrial carrier protein 180 267 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1266 Vra-Chr9 20317701 20322109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1266 5 377 Organic Solute Cotransporters AT3G51870 69.129 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1266 K14684 - gmx:100796878 635.95