Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1260 ATGGACATAGCTATATTCTCTCCATCAGGCCTCTTTGGTGAAGATGACTGCCCTACTCGTGAGGAAGATGCAGACTCACAGGAAAGCTATGTTGAGAGGAAGCACCAGTTTCCTGGGATGGAGTTGATTGTCCGAGAATTTTCCTTTCATCAACTGAATGCTAATTTACTCTGGCCAGGGACGTTTTCATTTGCAGAATGGTTAGTTCAGCACAGATCATGCATTGAAGGAAGGCGTGCTATTGAGTTGGGGAGTGGCACAGGAGCTTTGGCCATATTTCTTCGAAAATCATACAATCTTGATATTACAACTTCCGACTATGATGACAATGAAATAGAGAAGAACATAGCTCACAACTGCCAGGCAAATGAAATACCTATCATTCCTCACATAAAACATACCTGGGGAGACAAGTTTCCAAATTCTGACCCTGACTGGGACCTGATAATTGCAAGTGATATCTTATTATATGTAAAGCAGTATGCAAATTTGATACAGACCATTTCCTTTCTTCTCAAATGTTACAAGCCACAGCTTAGCAGAGCGGTTTCTCCAACTGGAAATGATGAGAGTGATGGAGATGTAGTGTTGCCGCAGCCAGCCTTTTTGATGAGCTGGAGACGCAGAATTGGGAAGGAAGATGAATCTCTTTTCTTCAATGGTTGTGAAAATGCTGGTCTAAAGGTGAAGCATATTGGATCACGTGTATATTGCATCAACCCTATAGAAAATGAGATATCAGAAACAAAGTCTTGA 756 0.4153 MDIAIFSPSGLFGEDDCPTREEDADSQESYVERKHQFPGMELIVREFSFHQLNANLLWPGTFSFAEWLVQHRSCIEGRRAIELGSGTGALAIFLRKSYNLDITTSDYDDNEIEKNIAHNCQANEIPIIPHIKHTWGDKFPNSDPDWDLIIASDILLYVKQYANLIQTISFLLKCYKPQLSRAVSPTGNDESDGDVVLPQPAFLMSWRRRIGKEDESLFFNGCENAGLKVKHIGSRVYCINPIENEISETKS* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1260 251 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 28 241 IPR019410 -
Vra9g1260 251 Gene3D Vaccinia Virus protein VP39 28 243 IPR029063 -
Vra9g1260 251 CDD AdoMet_MTases 79 173 - -
Vra9g1260 251 PANTHER PROTEIN-LYSINE N-METHYLTRANSFERASE EEF2KMT 28 241 - -
Vra9g1260 251 Pfam Lysine methyltransferase 53 173 IPR019410 -
Vra9g1260 251 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 32 173 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1260 - - gmx:100803961 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g1260 9 20156949 20173060 Vra9g1260 9 20156949 20173060 ECH