Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1251 ATGATGGCATGCCAAGATTGGCCTGAGCCAGTGATTAGAGTTCAAGCCTTGGCTGAAAGTGGCTTAACCACAATCCCTGAACGTTTCATAAAGCCTAAGTCCCAAAGGCCCACTGTTTATAGCCATGCTTACTCTCACACTACTCCTGAGGACATCAACATCCCTGTAATTGACATGAAACACCTCTATGGCATGGAGGAGGGGCGGCGGGAGGAGGAGCTCCACCGTGTGGCGGCGGCATGCCAAGAATGGGGTTTTTTCCAGGTGGTGAACCATGGTGTGAGCCATGAGTTGATGAAGAGTGCTAGGGAGGTGTGGCGTGAGTTCTTTCACCAACCAATTGAGGTGAAAGAGGAATATGCTAATACACCTCTCACTTATGAAGGCTATGGAAGCAGGTTGGGAGTGAAAAAAGGAGCTGTTTTAGATTGGAGTGACTATTTCTTTCTCCATTACATGCCTTGTTCCCTTAGGGACCAAAACAAGTGGCCAAACCTCCCAACATCCTTAAGGAATGTGATATCTGAATATGGTGAAGAAGTTGTTAAGCTAGGAGGAAGGGTTCTTGAGATACTGTCAGAGAATCTTGGGCTGAAAAAGGATTTTCTGCTGAATGCATTTGGTGGGGAGAAACATCTTGGTGCTTGCTTAAGGGTGAATTTCTATCCAAAATGCCCACAACCTGATCTCACTATGGGTTTGTCCTCTCACTCAGACCCTGGTGGGATGACCATTCTTCTCCCTGATGAAAATGTTTCTGGTCTTCAAGTTCGCAGAGGAGACGATTGGATCACTGTTAAACCCACCCCAAATGCTTTTATCATCAACATTGGTGACCAAATTCAGGTGCTGAGCAATGCTGTTTACAAGAGCATAGAGCACAGGGTGATTGTGAACTCAGACAAAGATAGAGTTTCATTGGCTTTTTTCTATAACCCCAGGAGTGATATACCTATTGAACCTGCCAAGGAGCTTGTGACTGAGGATAGGCCAGCACTATACCCATCAAAAACTTTTGATGAGTATAGACTTTACATTAGGACAAAAGGACCTAGCGGAAAAGCTCAAGTTGAATCTTTGATTTCCAAATGTGATTCAAGTTGA 1104 0.4493 MMACQDWPEPVIRVQALAESGLTTIPERFIKPKSQRPTVYSHAYSHTTPEDINIPVIDMKHLYGMEEGRREEELHRVAAACQEWGFFQVVNHGVSHELMKSAREVWREFFHQPIEVKEEYANTPLTYEGYGSRLGVKKGAVLDWSDYFFLHYMPCSLRDQNKWPNLPTSLRNVISEYGEEVVKLGGRVLEILSENLGLKKDFLLNAFGGEKHLGACLRVNFYPKCPQPDLTMGLSSHSDPGGMTILLPDENVSGLQVRRGDDWITVKPTPNAFIINIGDQIQVLSNAVYKSIEHRVIVNSDKDRVSLAFFYNPRSDIPIEPAKELVTEDRPALYPSKTFDEYRLYIRTKGPSGKAQVESLISKCDSS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1251 367 SUPERFAMILY Clavaminate synthase-like 10 348 - -
Vra9g1251 367 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 165 IPR026992 -
Vra9g1251 367 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 8 361 - -
Vra9g1251 367 Gene3D - 9 348 IPR027443 -
Vra9g1251 367 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 212 313 IPR005123 -
Vra9g1251 367 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 361 - -
Vra9g1251 367 Pfam 2OG-Fe(II) oxygenase superfamily 215 313 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1251 Vra-Chr9 19779606 19782593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1251 14 360 Glycosyltransferase AT5G59530 33.051 2.99e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1251 - - pvu:PHAVU_010G000300g 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g1251 9 19779606 19782593 Vra9g1251 9 19779606 19782593 ECH