Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1242 ATGATCCCTTCAGGGACAATGAAGCCTCCCAGAGTAAAGCTTCCTCTGCCCATCATTATCACCACAATCTGTGTTCTTCTCTTCATAGCAGTTTTGTATGCTGAGAGACTAAGTTTCCCTAACTCCAGCTCCATTTTCAAGTTCAAAACATGTACTAGAAAGCACACTAAATCAAAGTCTAATGATAAAAAGAATGAGGAAGTGTTTGCAAATGCCTCATGGACTGATGATAGGTTCGATTTTGACCCAGAAGAGTGCAATGTTGCAAATGGAAAATGGGTGTTTAACAGTTCATTGAAGCCTTTGTACTCAGACTCAAGTTGTCCATACATAGATAGACAGTTTTCATGTGTCAAAAATGGAAGGAATGACTCTGACTACCTCCATTGGGAATGGCAGCCAGAAGATTGCACCTTGCCCCCGTTTAATCCAGAGCTGGCCCTCAAAAAGCTTCAAGGAAAGAGGCTATTATTTGTAGGGGATTCACTACAAAGAAACCAGTGGGAATCTTTTGTATGTTTGGTGCAAGGTGTGATACCTGAAAAGAAAAAGTCAATGAAACGAGGGCGTGTGCATTCTGTCTTCAAAGCCAAGGAATATAATGCTACCATAGAGTTCTATTGGGCACCATTTTTAGTGGAGTCCAACAGTGACATTCATATCATAGGAGACCCCAAGAAGAGAATAATAAAAGTGGATGAAATCACAGAGCGTGCCAAAAACTGGACAGGAGTTGATATCCTTGTTTTCAATACCTATGTATGGTGGATGAGTGGCCTTAGAGTGAAAGCACTATGGGGTTCATTTGCCAATGGAGAAGAAGGGTATGAAGAATTGGATACACCAGTTGCTTACAAATTTGGTTTGAGGACTTGGGCCAATTGGGTTGACTCAACTATTGATCCAAACAAAACCAGGGTCTTCTTCACAACCATGTCACCTGCACACACAAAAAGTGCAGACTGGGGCCACAAGGATGGTATCAAATGCTTCAATGAGACAAAGCCAGTGAAGAAGAAGAACCACTGGGGAAGTGGGTCAAACAAGGATATGATGAGTGTGGTGGCCAAAGTTGTGAAGAGAATGAAAGTTCCTGTGAATGTGATCAACATAACACAGATCTCAGAGTATAGGATTGATGGTCATTCTTCTGTTTACAGTGAAACTGGGGGCAAAATTTTGACTGAGGAGGAAAGGGCCAACCCACGAAATGCAGATTGCATTCATTGGTGTTTGCCTGGAGTTCCAGATACATGGAATCAAATATTTTTGGCAATGTTGTAA 1284 0.4167 MIPSGTMKPPRVKLPLPIIITTICVLLFIAVLYAERLSFPNSSSIFKFKTCTRKHTKSKSNDKKNEEVFANASWTDDRFDFDPEECNVANGKWVFNSSLKPLYSDSSCPYIDRQFSCVKNGRNDSDYLHWEWQPEDCTLPPFNPELALKKLQGKRLLFVGDSLQRNQWESFVCLVQGVIPEKKKSMKRGRVHSVFKAKEYNATIEFYWAPFLVESNSDIHIIGDPKKRIIKVDEITERAKNWTGVDILVFNTYVWWMSGLRVKALWGSFANGEEGYEELDTPVAYKFGLRTWANWVDSTIDPNKTRVFFTTMSPAHTKSADWGHKDGIKCFNETKPVKKKNHWGSGSNKDMMSVVAKVVKRMKVPVNVINITQISEYRIDGHSSVYSETGGKILTEEERANPRNADCIHWCLPGVPDTWNQIFLAML* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1242 427 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 427 IPR029962 GO:0016413
Vra9g1242 427 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 139 426 IPR026057 GO:0016740
Vra9g1242 427 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 11 427 - -
Vra9g1242 427 Pfam PMR5 N terminal Domain 84 137 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1242 Vra-Chr9 19481408 19484382 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1242 - - gmx:100790014 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g1242 9 19481408 19484382 Vra9g1242 9 19481408 19484382 ECH