Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1224 ATGAGAACTGAGCTACTCTCACAATTTCTAGCCATGCCATTGTTTTGGCTGTGCCTCTGTAACAACCTTTTTCTGGTTTCTGGCCTTTGTCTTCATGATCAGAGATCATTGCTGCTCCAACTCAAGAACAACCTGACTTTCACCATTGAAACGAGTAGCAAACTCAAGTCATGGAATCCATGTAATGATTGTTGCGGTTGGGTAGGTGTAAAGTGTGACAAGGAGGGACATGTTACTGCTCTTGACCTCAGTGGTGAATCAATCACTGGTGGTTTTGGCAATTCAAGTAGCCTTTTCAGTCTTCGACATCTCCACAAATTGAATTTCGCTTATAACGATTTCAATTCTGTCATTCCATCTGCATTTAAGAGGTTGGGAAATTTGACTTATCTGAATTTATCATGTGCGGGCTTTCTGGGTCAGATTCCAATAGAGATTTCTCAAATGACAAGGTTGGTTACTCTTGATCTCTCTTCTCTTCTCTGTTCATCTGGGCAAGAGCTGAACCTGGGGAACCCAAATCTACGAAAGCTTGTACAAAATCTCACCAGTATTAGGCAACTGTATTTGGATGGTGTAAGTATATCAGCTGCAGGACATGAATGGTCCAGCGCTTTGATGTCACTGCATTACCTGCAAGAAGTTCGCATGTCATTTTGCAATCTCTCAGGACCCCTGGATCCTTCCCTTGCAAGACGTGACAATCTATCGATCATTGTTCTTGATTGGAACGATTTATCATCCGCAGTGCCAGAAACATTTGCCAATTTCAAAATGCTGACCATCCTAAGTCTTTCTGCTTGTCAGTTGACTGGAACATTTCCACAGAAGATATTCAACATCGGAACATTGTCAGTTCTTGACCTATCCTTCAACATCAATCTCCAAGGTTTGTTCCCAGAATTTCCACCAGGATCTCTTCACACCTTAACAGTGGCTAACACAAGCTTCTCTGGAACAGTTCCACACTCTATTGGTAACATGAGGAACTTAACTGAATTAAATTTTTGTTCATGTCGATTTAACGGAACGCTTCCGAATTCACTGTCAAACCTCACAGAACTCAGTTACCTGGACTTGTCATTCAACAACTTCACAGGTAGAATTCCATCATTTAATTTTGAAGGACTGAACAATCTTGTTACCATTGATCTCAGTAATAACTCAATTAGTGGGAGCATTCCTTCATCCCTTTTTACACTCCCCCAGCTGAAAAGTATTATATTTTCCCATAATCACTTTGCTCAACTAGACGAATTCACAATTGTTTCTTTTTCGAAATTAGACATCCTCCATTTAAGTAGCAATAATCTATTAGGGTCTTTTCCAACATCTGTATACCAACTCAGTAGACTCTCAGTCCTCGAACTTTCTTCAAACAAGTTAAATGGGACAGTGCATCTAAATAAGCTTTCGGAGCTCAGAAATTTAACTACTCTGGATCTTTCATACAACAACTTATCAGTCGATGTGAATGTTGCAAATGCTGACCCATCTTACTTTCCCAGTATTTTCGATCTAAGGTTGGCATCATGCAACTTGAAAACTTTCCCTGCTTTCTTGAGAAATCACTCAACAATATCCTCTCTAGATCTTTCGGATAACCATATCCAAGGAATAGTACCCAACTGGATTTGGAAACTACCGAATCTTGCAAAACTTAATATTTCTCATAATTTGTTGACTCATTTGGAAGGACCTTTTCAGAATTTTTCTTCCGAGTTGGAAGAGCTTGACCTTCATCATAATAAACTTCAGGGGCCAATACCATTTTTTCCTGAAAAAGGAATCTATTTGGATTTTTCAGACAACAGATTTAACTCTGTTATTCCACGAGACATTGGTAATTACCTGTCTGTAACATATTTTTTCTCTCTCTCAAACAATACTTTGAGTAGCACTATACCTGATTCCCTCTGCAATTCTTCAAATCTTGGATTTCTTGATCTTTCCAATAACAACATTTCTGGAAGAATTCCTTCGTGTTTGATGAAAATGAGTAAGACCCTTGAGTTATTAAATCTTAGAAAGAATAGTCTCATGGGCCCCGTCCCAGATAAGTTTTCAGCTGTCTGTGCTCTAAGGACTCTGAATCTGCGTCAAAATAAATTAGATGGAAAGATTCCGAAATCTCTTTCTGATTGCACATCATTGGAAGTATTGGACCTTGGAGAAAATAAAATTATGGATGTCTTTCCGTGTTTGTTGAGGAAGATATCCACACTCCGGGTCTTAGTCTTGAGAGAAAATAATTTACATGGTCACATTGGATGTGCAAACACCACTGCCAAATGGCGCGTACTTCAAATAGTTGATCTAGCCTTTAACAATTTCAGGGGTAAGCTACCTGAAACCTTTTTCACAAGCTGGGAGGCAATGATGTCTGAAGAAAACCAAGATGAATCGGAGGAAAAAAAAATCCGCCATAAGATCTATCAATATGGCCACCTATATTATGACGATTCAGTGACAGTTACAATGAAAGGTCAACAGATGGATCTGGTTAAGATTTTAACTATTTTTACTACGATCGACTTCTCATCCAACCATTTTGAAGGGGAAATACCAGAACAGCTATTTGAGTTTAAGGCACTCTATGCACTTAACTTGTCAAATAATGCTTTTTCGGGAAAAATTCCACAATCAATTAGAAATCTGAAGGAGGTTGAGTCCTTAGACTTATCAAAGAACTCACTGGTAGGAAATATTCCCACAGAACTTGCAACTTTATACTTCCTATCAGTCCTGGACCTCTCCTTTAATCATTTGGTGGGAAAGATCCCAACAGGCACCCAACTTCAGTCATTTCCAGCTTCTTCCTTTCAAGGAAATGATGGGCTCTACGGTCCTCCATTGACAGAAGAACTAGATGGTACAGAGCCAGAGCCAGGGGTGTTACAAGAACACCAAAGAACAATTTCTACCATTGACTGGAATTTTATTAGTGTGGAAGTGGGACTGATATTTGGCCATGGAATGGTTTTTGGCCCACTCTTGTTTTGGAAGCAATGGAGAATATGGTATTGGAAAGTTATTAACAAAATTCTCTGTTTGATCTTCCCTCAATTGTATTTTGAATATGCAACCAAGAGAGGCCAAACCTCTGCAACTCTAAGGTGGCAGCATTAA 3129 0.3921 MRTELLSQFLAMPLFWLCLCNNLFLVSGLCLHDQRSLLLQLKNNLTFTIETSSKLKSWNPCNDCCGWVGVKCDKEGHVTALDLSGESITGGFGNSSSLFSLRHLHKLNFAYNDFNSVIPSAFKRLGNLTYLNLSCAGFLGQIPIEISQMTRLVTLDLSSLLCSSGQELNLGNPNLRKLVQNLTSIRQLYLDGVSISAAGHEWSSALMSLHYLQEVRMSFCNLSGPLDPSLARRDNLSIIVLDWNDLSSAVPETFANFKMLTILSLSACQLTGTFPQKIFNIGTLSVLDLSFNINLQGLFPEFPPGSLHTLTVANTSFSGTVPHSIGNMRNLTELNFCSCRFNGTLPNSLSNLTELSYLDLSFNNFTGRIPSFNFEGLNNLVTIDLSNNSISGSIPSSLFTLPQLKSIIFSHNHFAQLDEFTIVSFSKLDILHLSSNNLLGSFPTSVYQLSRLSVLELSSNKLNGTVHLNKLSELRNLTTLDLSYNNLSVDVNVANADPSYFPSIFDLRLASCNLKTFPAFLRNHSTISSLDLSDNHIQGIVPNWIWKLPNLAKLNISHNLLTHLEGPFQNFSSELEELDLHHNKLQGPIPFFPEKGIYLDFSDNRFNSVIPRDIGNYLSVTYFFSLSNNTLSSTIPDSLCNSSNLGFLDLSNNNISGRIPSCLMKMSKTLELLNLRKNSLMGPVPDKFSAVCALRTLNLRQNKLDGKIPKSLSDCTSLEVLDLGENKIMDVFPCLLRKISTLRVLVLRENNLHGHIGCANTTAKWRVLQIVDLAFNNFRGKLPETFFTSWEAMMSEENQDESEEKKIRHKIYQYGHLYYDDSVTVTMKGQQMDLVKILTIFTTIDFSSNHFEGEIPEQLFEFKALYALNLSNNAFSGKIPQSIRNLKEVESLDLSKNSLVGNIPTELATLYFLSVLDLSFNHLVGKIPTGTQLQSFPASSFQGNDGLYGPPLTEELDGTEPEPGVLQEHQRTISTIDWNFISVEVGLIFGHGMVFGPLLFWKQWRIWYWKVINKILCLIFPQLYFEYATKRGQTSATLRWQH* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1224 1042 Gene3D Ribonuclease Inhibitor 422 496 IPR032675 -
Vra9g1224 1042 SMART LRR_typ_2 910 943 IPR003591 -
Vra9g1224 1042 SMART LRR_typ_2 474 497 IPR003591 -
Vra9g1224 1042 SMART LRR_typ_2 691 715 IPR003591 -
Vra9g1224 1042 SMART LRR_typ_2 101 124 IPR003591 -
Vra9g1224 1042 SMART LRR_typ_2 377 401 IPR003591 -
Vra9g1224 1042 SMART LRR_typ_2 716 738 IPR003591 -
Vra9g1224 1042 SMART LRR_typ_2 425 449 IPR003591 -
Vra9g1224 1042 SMART LRR_typ_2 548 570 IPR003591 -
Vra9g1224 1042 SMART LRR_typ_2 352 376 IPR003591 -
Vra9g1224 1042 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 377 1024 - -
Vra9g1224 1042 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 21 374 - -
Vra9g1224 1042 Gene3D Ribonuclease Inhibitor 304 370 IPR032675 -
Vra9g1224 1042 Gene3D Ribonuclease Inhibitor 30 200 IPR032675 -
Vra9g1224 1042 ProSiteProfiles Leucine-rich repeat profile. 379 401 IPR001611 GO:0005515
Vra9g1224 1042 Pfam Leucine rich repeat 102 159 IPR001611 GO:0005515
Vra9g1224 1042 Pfam Leucine rich repeat 363 414 IPR001611 GO:0005515
Vra9g1224 1042 Pfam Leucine rich repeat 527 585 IPR001611 GO:0005515
Vra9g1224 1042 Pfam Leucine rich repeat 427 487 IPR001611 GO:0005515
Vra9g1224 1042 Pfam Leucine rich repeat 669 728 IPR001611 GO:0005515
Vra9g1224 1042 PRINTS Leucine-rich repeat signature 380 393 - -
Vra9g1224 1042 PRINTS Leucine-rich repeat signature 474 487 - -
Vra9g1224 1042 SUPERFAMILY RNI-like 241 590 - -
Vra9g1224 1042 SUPERFAMILY L domain-like 29 301 - -
Vra9g1224 1042 Gene3D Ribonuclease Inhibitor 201 303 IPR032675 -
Vra9g1224 1042 Gene3D Ribonuclease Inhibitor 497 961 IPR032675 -
Vra9g1224 1042 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Vra9g1224 1042 PANTHER DISEASE RESISTANCE FAMILY PROTEIN/LRR PROTEIN 377 1024 - -
Vra9g1224 1042 PANTHER DISEASE RESISTANCE FAMILY PROTEIN/LRR PROTEIN 21 374 - -
Vra9g1224 1042 SUPERFAMILY L domain-like 595 704 - -
Vra9g1224 1042 SMART LRR_sd22_2 715 744 - -
Vra9g1224 1042 SMART LRR_sd22_2 149 170 - -
Vra9g1224 1042 SMART LRR_sd22_2 449 473 - -
Vra9g1224 1042 SMART LRR_sd22_2 352 379 - -
Vra9g1224 1042 SMART LRR_sd22_2 572 601 - -
Vra9g1224 1042 SMART LRR_sd22_2 474 495 - -
Vra9g1224 1042 SMART LRR_sd22_2 886 905 - -
Vra9g1224 1042 SUPERFAMILY L domain-like 669 952 - -
Vra9g1224 1042 Gene3D Ribonuclease Inhibitor 371 421 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1224 Vra-Chr9 19057729 19060962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1224 29 996 Receptor kinase-like Gene Family AT1G47890 36.763 4.27e-158 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1224 - - gmx:100806632 1343.95