Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1222 ATGAGGGATCCGAATCTGGAGTTGCAGGAATCGGGTTGGGAGGAACTGCGTAAGGAAGCGCGCAAGATCGAGGGCGATCTCGACGTCAAACTCTCTTCCTACGCCAAACTCGGCGGCCGCTTCACGCAAACAGGTCATGTGGATGGTGGTTCACCACCTCTTGGGTCCAGTAGGTCTTGGAAGTCCATGGAAATGGAAATCCAGTCTTTGCTGGAGAAACTGTTGGACATAAATGATTCAATGAGTAGATGTGCTGCATCTGCCGGACCGGCTACTTCTGTAACTCAAAAGTTGGCTAGGCACAGAGACATTCTTCATGAGTTTACCCAGGAATTTAGGCGTATCAAAGGGAACATAAACTCAATGAGGGAACATGCAGAGCTTTTGAGTTCTGTCAGGGATGATATTACCGACTTTAAGACATCGGGCAGTATGTCACCAAGGATGCAGTTGCTACGGGAGAGGGCTGCCATCCATGGAAATATATCTCATATGGATGATGTGATTAGTCAAGCTCAAGCAACAAGAGCTGTGTTGGGTTCTCAGAGAGCCTTGTTTACTGATGTTCAAGGGAAAGTGAAAGGTCTTGGTGACAAGTTCCCCATGATTCAAAGCCTTCTTGGTTCAATAAGAAGGCGGCGTTCAAGGGATACTCTTATTCTGTCAGCAGTAATTGCTGCTTGA 684 0.4737 MRDPNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGGRFTQTGHVDGGSPPLGSSRSWKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLSSVRDDITDFKTSGSMSPRMQLLRERAAIHGNISHMDDVISQAQATRAVLGSQRALFTDVQGKVKGLGDKFPMIQSLLGSIRRRRSRDTLILSAVIAA* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1222 227 PIRSF Golgi_SNARE 7 227 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Vra9g1222 227 Pfam Snare region anchored in the vesicle membrane C-terminus 150 214 - -
Vra9g1222 227 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-2 4 227 - -
Vra9g1222 227 PANTHER GOS-28 SNARE- RELATED 4 227 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1222 Vra-Chr9 18915611 18931183 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1222 K08495 - gmx:100781813 403.675