Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1136 ATGGAGAGTTCCGTTGTGGGAGAAAGGAGTGGTCGCGTACCACTGTCAGAGGTGGTGGCAGATTGTGTGAAGCGGTGGTTTAGAGATGCTCTGAAAGAGGCTAAGACAGGGGACATAAACATGCAAGTGTTGGTGAGTCAGATGTACTACAGTGGCTACGGGGTTCCCAGAGATGCTCAGAAGGGAAGAGTTTGGTTGACCAAAGCATCCAGGACTAGATCTTCGGTTTGGAAAGTAGGTGATAAGCACCCAGGTTATAATGCTAGTGACTCTGATTCCGATGAATTGAAGGAGGATTCTTAA 303 0.4785 MESSVVGERSGRVPLSEVVADCVKRWFRDALKEAKTGDINMQVLVSQMYYSGYGVPRDAQKGRVWLTKASRTRSSVWKVGDKHPGYNASDSDSDELKEDS* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1136 100 SUPERFAMILY HCP-like 27 70 - -
Vra9g1136 100 Gene3D Tetratricopeptide repeat domain 20 83 IPR011990 GO:0005515
Vra9g1136 100 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 100 - -
Vra9g1136 100 MobiDBLite consensus disorder prediction 78 100 - -
Vra9g1136 100 PANTHER EXPRESSED PROTEIN 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1136 Vra-Chr9 15473401 15478369 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1136 - - gmx:100527831 169.088