Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra9g1135 | ATGCCGCTCTCGAAGTACCGCGTGCGGAACGAGTACAGTTTAGCGGATCCCGAGCTGTATCGTGCGGCCGACAAGGATGATCCAGAAGCGCTTCTCGAAGCCGTCGCCATGGCTGGACTCGTTGGACTCTTGCGCCAGCTTGGCGACCTGGCCGAGTTTGCTGCTGAGATCTTCCATGATTTACATGAAGAAGTAATGGTTACCGCTGCAAGAGGCCACGGTCTCATGGCTCGTGTTAAACAGCTTGAGGCTGAAGTTCCTTCACTGGAGAAGGCTTTCTTTTCTCAAACTCATCACTCTTCATTCTATACCAATGGAGGGATTGATTGGCATCCTAATCTACAGTCTGAACTAAATCTTGTGACTCGAGGAGACTTACCTCGATTTATAATGGATTCATATGAAGAATGTCGGGGTCCTCCAAGACTGTTTCTTCTGGATAAGTTCGATGTAGCTGGGGCTGGGGCATGCCTTAAGCGTTATACTGATCCATCATTCTTTAAAATAGAATCGAATTCACTTGTAAATGATACAATAGAAGTTCAGAGAGAGAAGAGAATTCGTAAAGTCAAGCTGAAGAAAGGAGCAAGGCTGAGGGATGGTGAAGCTCCTAATGTTGTACCATCGCATTCAAAATTACATCAGCTGCTTCTTGAGGAGCGTATTGAAAATGGTTATAGTAATCCTGCAAGACTAGTGAAGTTGAAAAAAAGACACATGAATGGACCAACTGTTGAAGCAGGAGATGGTAAGAGTTACATGGAGAAATTTCTGGAATCTCCTTCACCTGATCAAAAGATGGTTTGTGAAACTTCAATCTTTCCGTTGCCTGTCAAATTGACATCAGATGATACTAGTGAGACTGGGATTAAAATTCTTGAAATCAGTAGCATTAGTCCTGTGAAAAGGTCAAAGGGAAATAAAAACACCCATTCATCCCTTGATGAGCAGGAACTAGAACTAAAACCATCTTCAGAAATGGATGGTGGGACTGATGGAGATCCTGTGAAGGTGAAAGAACAAGTCTCATCTGGTGTGACAGATAATATGTCTTCTAATGATCGTAAGTTTCTTGATGTAGCACAATTGGCTGTTGATGAACGAAAGATAATAGAAGGTAACTTAGATGGGTACCATTCGGATGATGTGACTAGTGAAGTTGACAATTACATGGATGCTTTAACTACCATGGAATCAGAATTGGATACAGATAACGAGTATAAACCTAAGAATAGCTTCTTGAATGTTGGAAAGGCAACAAATACCAAGGATAAAGAAGAACAACAACTACAAGCACATTTTTCAGATTCTCAATCATTTGGGGACTCTTCAATGTCTGATGACAGTAATTCTTTTAAACAAGATAGAAATGAAGAAATTATTCAAGTGCAAGCTAAGTCGTCAGATTCTCAATCAACTGGAACCTTCTCTTCATTGGACAATCATAGTTCACTCAGAAGAGATATAAATGGGCATCATATAGAACCACAAGCTCACCTCTCAGATTATCCATCTGTTGGAAACTCCTCTACATCAGATGAAAACGATTCTTTCATGAAAAATGGATCCTATTCATCCCAGTCTGAATCATTAAGCACCGTGGTTGAAAATACACCAGGACCTTTGTTATTCACAAATACTAAGTACTATGGACCGGTGGTTGAAGATGCACCATCCAACAAGCCTCCCCAAAATGTTGAGTTTCAACACACAGATTGTGGGGGGTCTGTCATGCATGATGATACTCCTGTTCATGAAGAAGAGATTTCTGATTTTGGGCAAGCCTGTTCAGATATGACGACTTCAGGACAGGGGTTGTGTTCTGATATTGGATCCATCTCTCAGGTGGTCCTACCCACAGCAACTGAATCAGGCGTAATCTCATCTGATCCTGTTGAACTTAATTTAAGGTTAGATGGTGATGATGCAGACAGAACACAAGATGATGATGCAGGCAGAACAGATGACAATGACGATCCAGGCAGAATAGGAGATGACAATGTCGATGCAGGCAAAAGAAGTGATGATGATGCAGACAGAACAGGTCTTGTTGAATCTATTACTTCCAAGCCTGTTTCTCTCTCCCTCACAAAAGACAATGCTTGTCCTGTTGATTCTTCTGATAAAACATCATTCGACAACTTGGATGATGATGATGATCCATGTATTCACTCTAATAATCTGTTACAAGTTTCTAGTGATTTGGAGTTTATTGCTCATGGAGACGAATGCAATTCTCATTCTGAAATCAAAATGTTCCCAGCAAGACCTACAAATGAAAACATTTCTGAAATTTTGGCTAATGGAGATATTGATTCACCAGGAGAGGATCCTGTTTGCCCATCCACAGAAGAATTAAAAGTGAATTCAGGTGCTGTGCTGGCTCCTGATTGTCACGATTCAAAGGATCAAGGTTGCACTTCAGCAACGAAGCTTAGTTCAGAGACCCCTGTTGTGAAGATTCCTCCAATGAGTTGCTTTACCAGGGTGCTTTCCTCTGACTCAATTCAAAACAAAACACAGGAGGAACCACACTCAGCAGAAATTGAAGTTTCAAATCCTGATCTGCCATTGGAAGTTGATGAGGTACCAAAGATGGTGCATGATGATGAAATAAATGGATCTACCTGCAGTGTCGATCCACTTGAAGGTGATAGTCGTTTTAAACATCCATCTCCTGTTGATCATGTAATGGCAAATGATCTGGTGACCGGAAATGTTCAGTCAGAAGATCAATCTGTATTTTCTGTTCCTTGTGTTAATAGTGCTGAAGATGGTGTGCGCGTTGATACTTGTCCAGATTCATTTCAGACTTCTCCTTCAAGGGGTTTTTCAGATTCAGAAGAACCTCTATCGAATACTCATTCTTATAAAATGGACATGAAATCCAATGAAGTAGAATTTATGCAAAATGCCATGGACACAAATGCAGAGATGAGTGAGACTCGATTAGCACCACTGCCAGATGTAACATCACCTGATAATATTGCAGAGTTAGACGAATCTCTTACTATTTTTGCAGATTCACAGGAGAGGAAAGTTGACGAGCCAGTTGTCAGAGAATCTACAGAACTAGAGGACCATCAGAAGATAGTGGATCAACCAGTAATTACTTCTATGGAAGAAAAATTGAACCTGAACAAAACTGTTCTTTGTGATCTTCAAGATTCAGAATCATGTACTATTCAGAAGTTCCAACATAGTGCTTTTGTTGATAATGCAGAAACTTTGCTTGAATTTTCGGGGTTGGATTCCCAGCTGTCGCAATCAATATTTAATGGTCAGCATGATCCATTACAAAATGACAGAGATAGTTTTTTATCACCTTTGGGGAAACAGTTGGGACCTGAAACTGATTTAGATCTGTTCTCAAAATCCCAAATTGGTGAACAGGATGCAGAATATCCACTCGGAGAAGAAATAAACTTTGCCTCTGAGAAATCTCAATATCAGAAGATGCAAATATATCAATTGGAGCCTCAAAGCAATCATGCTACTTCTGGATGTGTGTCAGAAATACATGCAGACGAGCCATCACCAATTTATTCCTCACCAGCGTCATCTAGCCAGAATGCTGCAAAACTTGTCATGGATCCGTTGATGCTTCTTCTTCCTAGCCACTTTCCCCAGTCAACTGAAAATAGTCCTGATGAGATGCCACCTATGCCTCCTCTACCGCCTATGCAATGGAGAATGGGAAAGGTTCAGCATTCTTCCTTACCTTCACAGAGAGAAGAATTAGAAGTAAGTCAAACTTCAGTCCAGCCAATTAGGCCTGATGAAAATTCCCTATTTGGTTTACCAACTTCTGAGAAAGAGACCCCGTTTTATCAGAGTCCATTTTTGCCTGTCATGGCTATGGAAAGTGATCAGCTCGAACATTCTTCTGGGTTTCCTGTTGGTGTTTCAGGGCATTCTGTTGCCATACCTTTTCAATTTCCTATCATAGTTAATGAATCAAAAGGTCAATATAATTACCTCTTGTTGGATAAAAACCAAATTCAGAATCCCTTCTTAACCTTACCCATGGCATCTACAGGCATGTCTCATGATCTGATTGTTGCACCTGAGGAAAGAATGATGCAGAATTCAAACTCATGTGGGGCAGTACCAGAAGCTGCGTATGCTGTTTCAGGACATGATTCCATCCCTACACAAGAAAGTTCAACTCAACCTCCGCACCAGTTAATGTTGGAGACTAGATCAAATGATAAATCACTTAAACAGAGTATGGACAGGCCTCCAAATGTTCTTCCAATTGCTTCCGAGGGAGAAATGGGACTGAATTCAAACCCTTGTCCTACAATTCCACCTGCTGAATGTGCTGCATCTGGGCATGAGTCCGTTTCAACTGAAGAGAAACTGCCTGAGCCTCTAACTCAATTAGTGGTGAAGCCTAGTTCAGATGATAAAACACTTCAGCAGTCTGTTACTAGTTGGGTATCAATGGACAATCCTGACAGTCACATTGTTTCTTCCGGTAGAGAAGTGGAACGAAATTCTAACCCAGACCCTCCAATTCCACCTGTTGAATGTGCTGTTCCCGGGGCCGGACATGATTCTATCTCTTCTCAAGAAAAACCAACTCTACCTCCAAGTCAATTAATGTCAGGTACTAGTTCAGAAGTTCAAATCCTTCAGCAATCTATACATAATTCGGAAGGGGAACAAGAACGTTTGCCAATCTCATTCATGTCTCCACCAAACATGGAAAGTATGGAGCCTAATCAGAGTTTCATGACCTATGAGGGAGGAATGGCAAGGTCCTTGGATACATCTGATCATACCTTAGATGTGGAGAGTGAAAGGACTTATGGAAAACCAAAGAGTAAGCTTCTTCGTCCGCGAACTCCTCTAATAGATGCTGTTGCTGCACATGACAAAAGCAAGCTTAGGAGGGTTACCGAGCGGGTCATGCCTCAAACTGCACCGAAGGTAGATGAAAGAGATTCTTTACTAGAACAGATAAGAACAAAGTCCTTCAACTTGAAGCCTGCTGTGACCACGCGACCTAGCATTCAAGGTCCAAAAACAAATTTGAAGCTTGCAGCCATCTTGGAGAAAGCAAATGCAATTCGCCAGGCTTTGGCTGGAAGTGATGAAGATGACGATGCGGATTGGAGCGATTCTTGA | 5133 | 0.4154 | MPLSKYRVRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMVTAARGHGLMARVKQLEAEVPSLEKAFFSQTHHSSFYTNGGIDWHPNLQSELNLVTRGDLPRFIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKIESNSLVNDTIEVQREKRIRKVKLKKGARLRDGEAPNVVPSHSKLHQLLLEERIENGYSNPARLVKLKKRHMNGPTVEAGDGKSYMEKFLESPSPDQKMVCETSIFPLPVKLTSDDTSETGIKILEISSISPVKRSKGNKNTHSSLDEQELELKPSSEMDGGTDGDPVKVKEQVSSGVTDNMSSNDRKFLDVAQLAVDERKIIEGNLDGYHSDDVTSEVDNYMDALTTMESELDTDNEYKPKNSFLNVGKATNTKDKEEQQLQAHFSDSQSFGDSSMSDDSNSFKQDRNEEIIQVQAKSSDSQSTGTFSSLDNHSSLRRDINGHHIEPQAHLSDYPSVGNSSTSDENDSFMKNGSYSSQSESLSTVVENTPGPLLFTNTKYYGPVVEDAPSNKPPQNVEFQHTDCGGSVMHDDTPVHEEEISDFGQACSDMTTSGQGLCSDIGSISQVVLPTATESGVISSDPVELNLRLDGDDADRTQDDDAGRTDDNDDPGRIGDDNVDAGKRSDDDADRTGLVESITSKPVSLSLTKDNACPVDSSDKTSFDNLDDDDDPCIHSNNLLQVSSDLEFIAHGDECNSHSEIKMFPARPTNENISEILANGDIDSPGEDPVCPSTEELKVNSGAVLAPDCHDSKDQGCTSATKLSSETPVVKIPPMSCFTRVLSSDSIQNKTQEEPHSAEIEVSNPDLPLEVDEVPKMVHDDEINGSTCSVDPLEGDSRFKHPSPVDHVMANDLVTGNVQSEDQSVFSVPCVNSAEDGVRVDTCPDSFQTSPSRGFSDSEEPLSNTHSYKMDMKSNEVEFMQNAMDTNAEMSETRLAPLPDVTSPDNIAELDESLTIFADSQERKVDEPVVRESTELEDHQKIVDQPVITSMEEKLNLNKTVLCDLQDSESCTIQKFQHSAFVDNAETLLEFSGLDSQLSQSIFNGQHDPLQNDRDSFLSPLGKQLGPETDLDLFSKSQIGEQDAEYPLGEEINFASEKSQYQKMQIYQLEPQSNHATSGCVSEIHADEPSPIYSSPASSSQNAAKLVMDPLMLLLPSHFPQSTENSPDEMPPMPPLPPMQWRMGKVQHSSLPSQREELEVSQTSVQPIRPDENSLFGLPTSEKETPFYQSPFLPVMAMESDQLEHSSGFPVGVSGHSVAIPFQFPIIVNESKGQYNYLLLDKNQIQNPFLTLPMASTGMSHDLIVAPEERMMQNSNSCGAVPEAAYAVSGHDSIPTQESSTQPPHQLMLETRSNDKSLKQSMDRPPNVLPIASEGEMGLNSNPCPTIPPAECAASGHESVSTEEKLPEPLTQLVVKPSSDDKTLQQSVTSWVSMDNPDSHIVSSGREVERNSNPDPPIPPVECAVPGAGHDSISSQEKPTLPPSQLMSGTSSEVQILQQSIHNSEGEQERLPISFMSPPNMESMEPNQSFMTYEGGMARSLDTSDHTLDVESERTYGKPKSKLLRPRTPLIDAVAAHDKSKLRRVTERVMPQTAPKVDERDSLLEQIRTKSFNLKPAVTTRPSIQGPKTNLKLAAILEKANAIRQALAGSDEDDDADWSDS* | 1711 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra9g1135 | 1710 | MobiDBLite | consensus disorder prediction | 1516 | 1537 | - | - | |
| Vra9g1135 | 1710 | MobiDBLite | consensus disorder prediction | 635 | 683 | - | - | |
| Vra9g1135 | 1710 | MobiDBLite | consensus disorder prediction | 1522 | 1537 | - | - | |
| Vra9g1135 | 1710 | MobiDBLite | consensus disorder prediction | 302 | 336 | - | - | |
| Vra9g1135 | 1710 | Gene3D | - | 1619 | 1709 | - | - | |
| Vra9g1135 | 1710 | Gene3D | - | 103 | 207 | - | - | |
| Vra9g1135 | 1710 | MobiDBLite | consensus disorder prediction | 421 | 515 | - | - | |
| Vra9g1135 | 1710 | MobiDBLite | consensus disorder prediction | 308 | 335 | - | - | |
| Vra9g1135 | 1710 | Gene3D | - | 1 | 90 | - | - | |
| Vra9g1135 | 1710 | MobiDBLite | consensus disorder prediction | 432 | 448 | - | - | |
| Vra9g1135 | 1710 | MobiDBLite | consensus disorder prediction | 624 | 686 | - | - | |
| Vra9g1135 | 1710 | ProSiteProfiles | WH2 domain profile. | 1648 | 1666 | IPR003124 | GO:0003779 | |
| Vra9g1135 | 1710 | MobiDBLite | consensus disorder prediction | 1250 | 1270 | - | - | |
| Vra9g1135 | 1710 | PANTHER | WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED | 1412 | 1710 | - | - | |
| Vra9g1135 | 1710 | PANTHER | WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED | 554 | 645 | - | - | |
| Vra9g1135 | 1710 | PANTHER | WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED | 1 | 517 | - | - | |
| Vra9g1135 | 1710 | PANTHER | WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED | 667 | 1481 | - | - | |
| Vra9g1135 | 1710 | PANTHER | WASP-1 | 1 | 517 | IPR028288 | GO:0005856|GO:0030036 | |
| Vra9g1135 | 1710 | PANTHER | WASP-1 | 667 | 1481 | IPR028288 | GO:0005856|GO:0030036 | |
| Vra9g1135 | 1710 | PANTHER | WASP-1 | 554 | 645 | IPR028288 | GO:0005856|GO:0030036 | |
| Vra9g1135 | 1710 | PANTHER | WASP-1 | 1412 | 1710 | IPR028288 | GO:0005856|GO:0030036 | |
| Vra9g1135 | 1710 | MobiDBLite | consensus disorder prediction | 463 | 484 | - | - | |
| Vra9g1135 | 1710 | MobiDBLite | consensus disorder prediction | 935 | 955 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra9g1135 | - | - | var:108347390 | 3114.32 |