Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1126 ATGAGTCAAGCTACTATTCGAGGAAGCTTGCAAGAGGGTCTGCAAGATGCAGCATCAGTTGGAATTACAAATGATTTTGAGAAGAATGAGGGGAGATATGAATTCTCTCATTTTTTGCCTTCATCCATCAATGAAAAGCTGAGAAAACCTTTCAATTGTTGTTTTTCCAAGAAGATTTGTTGGCCATCTCTCGGGAGAAGCTGCAAAAAATGGATTAAGAACCCTTTGAACATGGCCCTTTTTTTATGGACAGTTTGTGTTGCTGTTTCAGGAGCAATTCTGTTTCTCGTCATGACAGGAATGCTGAACAAAATCCTTACTAAGCAGTCACAAAGAAACTCATGGTTTGAGTTCAACAACCAATTTCTCAATGCACTATTTACTCTCATGTGTCTATACCAACATCCAAAGAGGCTCCACCATCTTGTACTTCTTTGTAGGTGGAAGCCAAATGACATCATAATCCTAAGAAAAACATACTGCAAGAATGGCACTTGCAAGCCTCGTGAATGGATGCATATGATGGTGATAGTTCTGTTACTTCATGTTAATTGCTTTGCTCAATATGCCCTTTCTGGCCTTAACTGGGGTTTCAGTAGATCGGATAGGCCTATTGTTGGGGTTGTTATATGCATCTCCATTGCAATTGCTGCTCCTTCAGTTGCAGGAGTTTACTCAATTGCGAGCCCTCTTGGAAAAGAGTATGAAACTGAAGAAGCACAGAACAATATTCCTGTTAGTAATACATTTACATCAAGAAATGAGCATAGTATTGCTGAGTACACACCTCAATGGAAAGGGGGACTATTTGATCTTTGGGACAATCTTTTTGTGGCATGTCTCACTCTCTTTTGTAGTTTTTGTGCCTTTGGAAGGAATATGCAGAGACTTCATTTTGGTAACATGTTTGTTCACGTTGCAACTTTTCTACTCCTCTGTGTTGCTCCCTTTTGGATATTCAACATGGCTACCATCAATATTGAAGATGAGCCTGTGAGAATAGTTCTGCGGTTGATTGGTATATTTCTTTGTGTGTTTGGTTTACTCTACGGTGGCTATTGGAGGATTCAGATGAGGGAAAGATTTAACTTGCCACCAAATAAAATTTGTTGTGGGAATCCAGCAGTGACAGATTGCATACAGTGGCTATTGTGTTGCTGGTGTTCCCTTGCACAGGAAGTAAGAACTGCAGAATTCTATGACATAGTTGATGACAACTCTTTCTGCCAAAAACAGACTGAAAAGTCAGAAGATTATTCAATTCTCTCAGAAATTGAGTTTTCAAGAGAAAGAAAGAAAAATGTTATGGAAGCGCCCATTCCCCTCACAATTCAAGTTGATGATAATGACATCAAAAGAACATAA 1365 0.3919 MSQATIRGSLQEGLQDAASVGITNDFEKNEGRYEFSHFLPSSINEKLRKPFNCCFSKKICWPSLGRSCKKWIKNPLNMALFLWTVCVAVSGAILFLVMTGMLNKILTKQSQRNSWFEFNNQFLNALFTLMCLYQHPKRLHHLVLLCRWKPNDIIILRKTYCKNGTCKPREWMHMMVIVLLLHVNCFAQYALSGLNWGFSRSDRPIVGVVICISIAIAAPSVAGVYSIASPLGKEYETEEAQNNIPVSNTFTSRNEHSIAEYTPQWKGGLFDLWDNLFVACLTLFCSFCAFGRNMQRLHFGNMFVHVATFLLLCVAPFWIFNMATINIEDEPVRIVLRLIGIFLCVFGLLYGGYWRIQMRERFNLPPNKICCGNPAVTDCIQWLLCCWCSLAQEVRTAEFYDIVDDNSFCQKQTEKSEDYSILSEIEFSRERKKNVMEAPIPLTIQVDDNDIKRT* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1126 454 Pfam PLAC8 family 265 395 IPR006461 -
Vra9g1126 454 PANTHER - 28 422 - -
Vra9g1126 454 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 264 398 IPR006461 -
Vra9g1126 454 Pfam Protein of unknown function (DUF2985) 70 148 IPR021369 -
Vra9g1126 454 PANTHER PLAC8 FAMILY PROTEIN-RELATED 28 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1126 Vra-Chr9 15070737 15073508 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1126 - - vun:114167433 805.053