Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1094 ATGGGAACAAAGAGGGGCAGTTCGAGGATGAGTGTTTTGTTTGAAAGGTTGAGGAAGCTGCCAATGAAGGTGAAGATCTTTTGTGGGGCGTTGCTTGCTCTCTGTGCTTTGGTGGCCTTGAAGTTCACCTTCACAACCAATTACTATTACTTCATAGCCTCTGAAGCAGTCCATGTTATTGGAATCATTGCTCTCATATACAAGCTTTTTGCCCTCAAGACATGCTCTGGGTTATCCCTCAAGACTCAAGAGCTCACAGCTTTATTTCTAGCAGCAAGATTATGTTGTAGCACTTTGACAGAGGCTAACATACACACAGTGCTAGATCTGATATCTCTTTTTTCAACATTAGTGGTCATATGGATGATAAGATTCAAGTTGAAGTCATCCTATATCAAGGATCTTGACAATATGAAACTCTACTTTGTGGTTGTCCCTTCTGCAATCGTTGCAGTACTAATCCACCCTTTAACACACCATTGGCGTGTGATTCGAATAGTTTGGGCATTCAGTTTGTATTTGGAAGCTGTCTCTGTTCTTCCTCAGCTTCGTTTTATGCAGAATGCGAAGATGGTTGAAACATTTACAGGGTACTATGTATTTGCTCTTGGTGTTTCTAGATTCATGGCTCTGGCTTATTGGATAATTCAGATCTACGAGACCGGAGGAACATATCTATTTTTGGCTGGAAGTGGCTATTTTTGGTTTTTGGCAGCTTTTCTGGCTGAGATGGTTCAATCCTTCATCTTGGCTGACTTTTGTTACTATTACATGAAAAGCTTCATGCAAGGACAACTTTTGAGGAAAATGCCTGTTTAA 819 0.4078 MGTKRGSSRMSVLFERLRKLPMKVKIFCGALLALCALVALKFTFTTNYYYFIASEAVHVIGIIALIYKLFALKTCSGLSLKTQELTALFLAARLCCSTLTEANIHTVLDLISLFSTLVVIWMIRFKLKSSYIKDLDNMKLYFVVVPSAIVAVLIHPLTHHWRVIRIVWAFSLYLEAVSVLPQLRFMQNAKMVETFTGYYVFALGVSRFMALAYWIIQIYETGGTYLFLAGSGYFWFLAAFLAEMVQSFILADFCYYYMKSFMQGQLLRKMPV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1094 272 PRINTS ER lumen protein retaining receptor signature 50 69 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra9g1094 272 PRINTS ER lumen protein retaining receptor signature 77 97 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra9g1094 272 PRINTS ER lumen protein retaining receptor signature 168 188 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra9g1094 272 PRINTS ER lumen protein retaining receptor signature 190 204 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra9g1094 272 PRINTS ER lumen protein retaining receptor signature 204 222 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra9g1094 272 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 4 271 - -
Vra9g1094 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 4 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra9g1094 272 Pfam ER lumen protein retaining receptor 74 217 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1094 Vra-Chr9 14000027 14005848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1094 1 272 Miscellaneous Gene Families AT3G25160 59.926 2.59e-113 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1094 - K10949 gmx:100790733 454.521