Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1085 ATGAGAGGTTTAAGTTGTTTGTTAGTGTTTTCATTGGGAATTTTCATCCAAGTGAGTTACTGTGATAGCAGGAATACAACATGCTTGGCTGAGAAAAATGCTGGACTATTCATACTTGGAGATTCACTATTTGATAATGGAAACAACAACTACATCAACAGCACCACCGCTTACCAAGCAAACTATTATCCCTATGGAGAAACTTTCTTCAAATACCCCTCTGGCAGATTTTCTGATGGACGCATGATACCAGATGTCGTTGCTGAACTTGCTAAGTTGCCAATACTACCACCATACTTGCATCCGGGTCGTGTTGAACACGTCTATGGTGTCAATTTTGCTTCAGGAGGTGCTGGTGCTCTGCGTGAAACCGCTCAAGGATTTGTTATAGACCTGAAAACTCAGGTAAGTTATTTAAAAAATTTGAAGAATGTGTTGAGTGAGAGACTGGGAAAAGCAACAGCAGAGGAAATTGTGTCAAAATCTGTGTACTTGATTAGCATTGGATCCAATGACTATGGCTCTCTTCTCAACCCAGACTCAAATCCTGTGTTTCCTCCTGGAGATCATCAAGGGTTTGTAGATTCTGTAATTGGAAACCTCACAGATGCCATAAAAGAAATTTATAATCTTGGCGGAAGGAAATTTGGATTTGTTAATGTGGGTGCAATAGGTTGTTCACCTGGAATAAGGATTTTGGTGAATAATGGAAGCACATGCTTTGAAGAAGTACTAGCCATCGCAAGACTACACAACACTGCACTCTCAAAAAGGATTCATGAGCTAAAGAAACAGCTCAATGGATTCAAATATTCAATCACTGATTTCTATTCTACATCTCTTGAAGTGCTCAACAATCCTACAAAATATGGTTTCAAAGAAACAATTGTGGCATGTTGTGGAGGTGGACCATTCAGAGGAGATGGTAGCTGTGGAGGAAAGAAAGGGATCAAAGAATACGAGTTATGTAACAATGTCAATCAACATCTGTTCTTCGATTCTGTTCATCTTACTGACAGAGCTAGTCAGCATTTTGGAGAGCTGATATGGAATGGAAATCACACTGTCACAAGCCCTTACAATCTAAAACAGCTATTTCAATTTTAA 1107 0.393 MRGLSCLLVFSLGIFIQVSYCDSRNTTCLAEKNAGLFILGDSLFDNGNNNYINSTTAYQANYYPYGETFFKYPSGRFSDGRMIPDVVAELAKLPILPPYLHPGRVEHVYGVNFASGGAGALRETAQGFVIDLKTQVSYLKNLKNVLSERLGKATAEEIVSKSVYLISIGSNDYGSLLNPDSNPVFPPGDHQGFVDSVIGNLTDAIKEIYNLGGRKFGFVNVGAIGCSPGIRILVNNGSTCFEEVLAIARLHNTALSKRIHELKKQLNGFKYSITDFYSTSLEVLNNPTKYGFKETIVACCGGGPFRGDGSCGGKKGIKEYELCNNVNQHLFFDSVHLTDRASQHFGELIWNGNHTVTSPYNLKQLFQF* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1085 368 Gene3D SGNH hydrolase 28 354 IPR036514 -
Vra9g1085 368 CDD SGNH_plant_lipase_like 36 353 IPR035669 -
Vra9g1085 368 Pfam GDSL-like Lipase/Acylhydrolase 36 349 IPR001087 GO:0016788
Vra9g1085 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 24 367 IPR044552 -
Vra9g1085 368 SUPERFAMILY SGNH hydrolase 36 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1085 Vra-Chr9 13820929 13823527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1085 35 367 Acyl Lipid Metabolism Gene Families AT4G10950 31.395 1.25e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1085 - - vun:114165155 692.575