Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1082 ATGTACGCTGATCGCGTGGAGAATGGAGGGCGGAGGTCCGTGAAGGAACGCTTAAATGGGAATGGTATCAGTGGCCCTACTAGGCACCAACAACATCGTCAAATCACTGGCAAGAGGTCGAGGCAAGATGATAAGTGGGAACATGATCTCTTTGATGATGATGAACCACGGATCACTAATCGCAAGGTTAGCGCTCAAGATCTACGCCTCAAGCTTCAAAGGAAAGGTCTTCAACCTGCATCTCAGAGTGGAAAGAGTTATGCTCCAAAGATGCGGGATCTCCGTGAAAGGCTATCAGGGACAATGACAGTACAACCTACCAATGTTGATCCGCCCAAATCAAAAACTGTTAAACCAAGCAGTAAAAGTGTTGGTGCTGAGGCCCCTGCAGCGCAGATCAAAAGGCCAGCTGACCCAGCTCCTAAAAGGTCACGGAAGGCTGATTCTTCAATTGATGACTTTTTGCGGTCCTTGGGTCTTGAAAAGTACATCATTACTTTTCAGGCTGAAGAAGTTGATATGACAGCTCTCAATCATATGACTGATGAAGATCTCAAGGCTATGGGTATACCAATGGGACCAAGAAAGAAGATACTTTTAGCATTGGAGTCGAAAGTCTGA 621 0.4622 MYADRVENGGRRSVKERLNGNGISGPTRHQQHRQITGKRSRQDDKWEHDLFDDDEPRITNRKVSAQDLRLKLQRKGLQPASQSGKSYAPKMRDLRERLSGTMTVQPTNVDPPKSKTVKPSSKSVGAEAPAAQIKRPADPAPKRSRKADSSIDDFLRSLGLEKYIITFQAEEVDMTALNHMTDEDLKAMGIPMGPRKKILLALESKV* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1082 206 MobiDBLite consensus disorder prediction 100 121 - -
Vra9g1082 206 Gene3D - 148 206 IPR013761 -
Vra9g1082 206 PANTHER OSJNBA0060P14.15 PROTEIN 128 193 - -
Vra9g1082 206 PANTHER OSJNBA0060P14.15 PROTEIN 1 141 - -
Vra9g1082 206 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 128 193 - -
Vra9g1082 206 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 141 - -
Vra9g1082 206 MobiDBLite consensus disorder prediction 72 91 - -
Vra9g1082 206 MobiDBLite consensus disorder prediction 100 149 - -
Vra9g1082 206 SUPERFAMILY SAM/Pointed domain 147 202 IPR013761 -
Vra9g1082 206 CDD SAM_superfamily 153 203 - -
Vra9g1082 206 MobiDBLite consensus disorder prediction 36 66 - -
Vra9g1082 206 Pfam SAM domain (Sterile alpha motif) 147 203 IPR001660 GO:0005515
Vra9g1082 206 MobiDBLite consensus disorder prediction 1 66 - -
Vra9g1082 206 ProSiteProfiles SAM domain profile. 146 206 IPR001660 GO:0005515
Vra9g1082 206 SMART SAM_4 143 206 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1082 Vra-Chr9 13750024 13762566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1082 41 205 Glycosyltransferase AT3G07170 60.479 4.63e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1082 - - gmx:100784706 341.658