Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1080 ATGGATGCTACCGAATCGCAAACGGATTTGCAGAACCGACCCGGAATCTTCATCATTGGATCCTCAAACGTTGGCAAACGCACCATCATATCTCGATTGACCTCTGTTGATGTTGAGGATGCTTTTGATTCGGCTTCTGAAGTGAACGTCCATGGGTGGACTATCAATAATAAGTACTATACTGCTGATGTTTCTATATGGATGGCTCATCTTCGTGATGATTATTCTGCCGGTAACATGTCCCTGTTTCGACGCATGACTGCATTGGTGATGGTTTTTGACATGAATGAACCATCTTCCCTAGCTGCACTTCGAGAATGGGTGTCTCACACTGATATTCAGAACTTTGAGATTTTACTGTGTATTGGAAACAAAGTGGATCTGGTTTCTGGGCATCCAGCTCATGCTGAATACAGAAGGCGGTTGCTGAAACTAGAAGACTCTGCTGTAGATAGTTATTCAGAAGAGTATGGAATATCTGAATCAGAGGGAACTAGTTTATTGGGGGATGAGGCACCAGCATGGGACATCAGAAGGTCCTGTTTGGAATGGTGCACTGATCACAATATTGAGTTCATCGAGGCATGTGCTTCCAATGCTGTTTTTGACAAATGTTTGTCCATAGATGGTGATTTACAAGGAGTTGAACGTCTCCATGGTGCACTTTCTGCTCATATGTGGCCTGGAATGGTATTGAAATCTGGTGATAGGATAAATCAACCATCATTTCCTGAGAAAGAGGAGTTATCTTCAGAAGAATCTGACTATGAACCTGAGTATGAAGTATTATCAGCTGGTTCGGCTGATCCCTGGTATGAAAGTGAACAAGTATGGGTTTCTGCATCTTCCTTAAATGCAGGGGGATCAGCTCCTCAAAACAATCCTAGTGCAAAGGGTCAACAGGAGGATGGAATTAAACCTGATAAAGAGTCTGCGCCCACAACTTCAAGTGATGCAATTCAAGATGAAAGTGAGAGGGATGTGCTGCACAATACCATGGATTCTGAAGGAGATGAAAAGGCAAACGAAGGTAAATATCTTGACTTAGAGGATTTGGAACAGTTGATGTCGGAGATTGGGAATATGCGTGCAGGCTTAAGATTGATGCCTGATTTTCAAAGAAGGGACATGGCAGCAAAGCTCGCCATGAAAATGGCTTCCATTTTTGGAGGAGAGAGTGACGATGAGAAAATTTAG 1197 0.4302 MDATESQTDLQNRPGIFIIGSSNVGKRTIISRLTSVDVEDAFDSASEVNVHGWTINNKYYTADVSIWMAHLRDDYSAGNMSLFRRMTALVMVFDMNEPSSLAALREWVSHTDIQNFEILLCIGNKVDLVSGHPAHAEYRRRLLKLEDSAVDSYSEEYGISESEGTSLLGDEAPAWDIRRSCLEWCTDHNIEFIEACASNAVFDKCLSIDGDLQGVERLHGALSAHMWPGMVLKSGDRINQPSFPEKEELSSEESDYEPEYEVLSAGSADPWYESEQVWVSASSLNAGGSAPQNNPSAKGQQEDGIKPDKESAPTTSSDAIQDESERDVLHNTMDSEGDEKANEGKYLDLEDLEQLMSEIGNMRAGLRLMPDFQRRDMAAKLAMKMASIFGGESDDEKI* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1080 398 MobiDBLite consensus disorder prediction 284 346 - -
Vra9g1080 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 146 IPR027417 -
Vra9g1080 398 Pfam Ras family 16 140 IPR001806 GO:0003924|GO:0005525
Vra9g1080 398 Pfam Alpha and gamma adaptin binding protein p34 211 384 - -
Vra9g1080 398 PANTHER ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34 5 397 IPR019341 -
Vra9g1080 398 MobiDBLite consensus disorder prediction 236 262 - -
Vra9g1080 398 SMART rab_sub_5 16 208 - -
Vra9g1080 398 Gene3D - 1 207 IPR027417 -
Vra9g1080 398 MobiDBLite consensus disorder prediction 320 346 - -
Vra9g1080 398 MobiDBLite consensus disorder prediction 284 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1080 Vra-Chr9 13739153 13741881 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1080 K23878 - gmx:100813878 669.848