Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1068 ATGAATGGATATAAATCAGGTTCTGCTCTCCTTGTAAATGCTGAGGTTGATTCTATGGGAGGAGTTGTTGATGGCGGAATTGGGATAGGTTTGAAAATCTCTCCGCGCAGAGCAGCAATTGAAAAGGCTCAAGCAGAGCTCAGAGAGGAGTATGATGCTCGTGAAGAAAGAAGAAGAGAGCTTGAATTTCTTGAAAAAGGTGGGAATCCTTTGGACTTTAAGTCTGGGAATGCTGCTTCAGTTAGTGTGCAGTCTACTTCAATCACTGATCAGCCTCATGAGCAGTTTGTGACCAGTGAAGCAAAAGGTAGTTTTGCATTGACTGCCTCCCCTCATGCTGATTCTGTTGACAGTAGTGCTAGACCAGGGGCTCCTTTGGCTAGTGAACCTAATACTGCTGATAATCTGCAACTTTTTGACGGGGAGAATGAGTTACCTGACACTGAAAGGAGGTGCTTGAATAGGAGGAATAATATTGCTGTGTCAGAACAATCTTCCCAAATTGATGGAAGTCAAAATGCTAAGGAGACTGAAGATTCAGCTATTTTCCGGCCATATGCAAGAAGGAATAGATCTAGACCAATTCATGGTCCTCGAGGGCCTTCAAGGGAAGCAAAGGGGTTACTGTTGGAAACAAATAACCAAAAGAACCCTAATTTACCAACCATATCTAAGCCCGAGCCTTCCAGTTTAAATTGTGGTATTGGTGCTAAAAGTTTAACGACTAATAATACACTGAATGATGAGTTTGTTGGGATCCGAGATCACCAATCCACTATTGGTAGTGCTAGTGTTCCCAAAGACAAATTGGATATTACAGTGAACATAAACTTAAAAGAAAATCGTGAAACCCTACCTTCTGAAGACAATACTGTTCAAAATCCAATTCTCATGGCTACTGGAGAAGCTAATGTGGTTGAACTAAGCAAACCAATAGGTGTTGTCAATAGTGACTCTCCATCTCACAGACCTACTACTAAAGCTGAAAATGGGCCTTATGACTGTCAGCCAAATGGATTTGGCAATGTAGAAGTAGACAGGAAAAGTGTAACAAATGAAGGCCAAAATAACATTGCTAGATTAGGCAAGAAGAGTTTCGGTTTAGGGTCCTCGTGCACACAAACTAGTTTTGGTAGGCATGTAAATAATGATAGTGATATGTGTACTAATACAAAGAGTGTTGACGCTAATGAAAATACCATGGAACAAACATTTACATTAGAGAATAAGCTGAAATCTGCCAACTGTGAATTTGTGAAAGATAGGCATAAGACCAAAAATGGTGCTATTGTTAGCAATGAACACGATGCTGATTGTCCAGATCATTCTGGTAGTGATAATATCATCAAAGCTGAGGAAGATTTCCATATTAATAGTTCTTCCATGTCAAATATCAAGGGAGTACACAACGACAGTACCACACCAAAAGCTGATACAGATACTGTCTTAGTGGATCAGTCCAATTCTGTCAAGGAAAGCAGCTCAGAAAGACATCAGGTTCCTGTGGACGTGTCACTATCAGAATCTCCTCAGACTGTTCTAGCTGAAAAGGTAAAGAGTGCCACCTCTGATGATCAACCATGTGCCATGCACAATATGAAGTTAGTAGACAAGGCCCGTGAAGATTCTATTTTGGAAGAGGCTCAAATTATAGAGGCCAAGCGAAAGAGAATTGCAGAGTTATCTCTTCGCTCGTTACCAACACAGAACCACAGAAAGTCACATTGGGGTTTTGTTCTTGAGGAAATGGCATGGCTGGCAAATGATTTTGCTCAGGAGCGTCTCTGGAAGATAGCTGCTGCTGCACAATTGGGCCATCGGGCAGCTTTTACTTGTATGTCAAGATTTGAAAAACTAAACAAACAATTAGAGACAAGGGTTTTGTCTCACAAGATAGCAAAGGCTGTCATGCAGTTTTGGCAGTCAGCCGAGCTTCTTCTAGACAATGATGTTGAAAATGTCGATGCAAATGAAGCTATTAGAGACCAGAGAAGAAATTACAATATGCTGCCGCCGGAAACAACCACACTTTTGGAGGGACAAAATCCTGTCAAACGTCCTGCACTTAAAGTGGATGCATATGCTTTGAGATTTATAAAGGCTAATAGGTCTCATGGAATTTCCTCTGAAGCAGAGGCACCAACAACTCCTGAAAAGATTTTTGACTCAAGCACTGTGGATATGTCATGGGATGAGCATCTTAATGAAGAAAGTCTTTTCTACGAAGTTTCTCCTACTGCAGTGCAAACATATAGAAAAGCTATCGAATCTCATTTCCATCATTTTGAGAAAACTGGGAGTAGCATTCAAGAGGAAATTGAAACATCTGTGTATAATACCACAGCAGAGTTTGGATCACAAGAGAATGCATATGATGAGGAAGAAGGAGAAAATAGCACTTATTACTTGCCCAGTGTCTATGAGGGCAACAAATCATCGAAATCGGCACAGAAGAAACATAAAATTTTGAAGTCTTATACTCCTAGGTGTAGTGATGCTGGTGCTGATTTGCCTTATGTACACTATACAACTGGAACTCAACCATCCATGATGTTTGGGAAAAGACCTCCAAGTTTAAATGTTGGGTCAATACCAACAAAGCGCATGCGTACAGCTACTAGGCATAGAGTTGTAAGCCCTTTCACTAACATTGGGACAGCACAAGCTCAAGCTAAGGCAGATGCTTCAAGTGGTGATACCAATTCCTTTCATGATGACCAGAGTACTTTACATGTCGGACCCCTGATCCAAAAAGGGACTGAGGTGGAGTCAGTTGCAGATTTTGAAAAACAGCTATCTTATGATTCTGCAGAAACATTTCTTAAAACTAAGAAGAAAAAGGCAAAGACTTTGGGTTCGATGTATGATCAGGGTTGGCAGTTGGATTATGTTGTCCTAAATGAACAGCAGAGGGATCAGTCCAAGAAGAGAGGGGATAGTCATCACTTTGAATCTATTGGAAGTGGTGGTAAAGCTACTTGTTTGTATGGGCAACATAATGGGAAGAAACCAAAGGTAATGAGGCCACTCGATAGTCCTTTGGACAGTATCGTGCCACTGAGTAATTCTATTCCTTCCCCTGCTGCTTCACAAATGAGTAACATGTCATCTCCTAATAAATTTATCAAGATCATTAGTGGTCGAGACAGGGGCCGGAAAGCTAAATCTCTGAAGACTTCTGCTGGACAGCCTGGTTCTGGAAGTCCTTGGTCACTATTTGAAGATCAGGCTCTTGTGGTCCTGGTGCATGATATGGGTCCAAACTGGGAGCTCGTGAGTGATGCTATCAATAGTGCTCTCCAAATAAAGTGTGTCTTTCGCAAACCCAAAGAGTGCAAGGATCGTCATAAAATTTTAATGGATAGAACTACTGGGGATGGTGCAGACAGTGCTGAAGATTCAGGGTCTTCACAATCTTATCCGTCTACGTTACCTGGAATTCCTAAGCAGGGTAGTGCCAGGCAGCTATTTCAACGGTTACAGGGGCCAATGGAGGAGGATACATTGAAGTCTCATTTTGAGAAAATTATAAAGATTGGGCAGAAGCAACATTACCTTAAGAATCAGATTGATAACCAGGATTCAAAACAAGTAGTGGCTGCCCATAATTCACATGTGATTGCTCTTTCCCTAACGAGTCCCAACAACCTGAATGGAAATCTTTTAACGCCACTTGATCTCTGTGAAGCTGAAGAAACAAACCCAGATGTCCCAGCCGTAGGGTACCAAGGTTCTCATCCTGGTGGTTTGACATTACCTCATCAAGGTTCTATACAGTCAACGCATCCCACATCTGGGGTGAACTCTTCCCTACCTGGGTCTTCTGGTATGGCTCTCGGCCATAACTTGTCATCATCATCTGGTTCGGCCATAACATCTGTCAGGGGTGGTAGATATGGAATTCCAAGGAATTCTCCTACACCAATGGATGAGCAACAGAGAGTACAATACAATCAAATGTTACCTGGAAGAAACATTCAGCAGAGCATTTCAGTTACTGGGACTCTTTCTGGAAGTGATCATGGTCGCATGCTTCCGGGCGGAAATGGTATTGGCATAATGGGTGGAATTAACAAAGCCATGGCAATGTCTAGGCCAGGGTTTCAAGGATTAGCATCACCATCGATGCTTAATTCTGGAAGCATGATTTCCTCTAGTATGGTTGGGATGCCAAGCCCTGTAAATATGCACTCTGGAGTTGGCCCAGGACCAGGCAACTCAATTTTAAGACCTCATGAGACACTACATATGATGAGGCCTGGCCATAACCCAGAACATCAAAGACAAATGATGGTTCCAGAGCTTCAGATGCCAGTCACCCAAGGGAACAGTCAAGGTATTCCTGCTCTATGCGGGCTGAGTTCTTCGTTTAGCAATCAGACAACACCAGCTGTTCAGCCTTATCCAGGACATGCACAACAGTCACACCAACTCTCGCAGCAGCAGTCCCATCTCAGTAATCCTCGTCCCCATCTTCAAGGTCCGAGTCATACTAATTCACAGCAGCAAACCTATGCGGTCCGGTTAGCGAAGGAAAGGCAAATGCAGCAACGATATCTCCAGCACCAGCAGCAGCTTGCTGCATCCAATGCATTGTTGCCACATGTCCAGGCAAAGTCTCAACTTTCCATATCATCAACACCATTGCAGAACAATTCTCAGGTTCAACCACAAAATTCTTCTCAGCAAGTCCCACATTCACCTATAACGCCATCATCCCCTTTGACTCCCATGTCATCCCAGCTCCAACAACAGAAACTTCACCAGTCACAACCTGGCTTCAGCAGAAATCCCCCCGCTAGTGGGTTGACTAACCAAGTAGCAAAGCAACGCCCACAACATCCACCACAGCAGCCACCACCACAACAGCAGTATCAACAATCTGGTAGGCAGCATCCTAATCAACGGCATAATGTACAGTCTCAACAGCAGGCAAAACTTATGAAGGGAATGGGAAGAGGAAGTATGTTGGTCCATCCGAACCTCTCTGTGGATGCTTCTCATCTAAGTGGGCTCTCTCTGCCTGTGGGAAGTCAAACTGGTGAAAAAGGGGACCAAATCTTGCACATGATGCAAGGTCAAAATATATATCCAGGATCTGGTTTAAACCCAAATCAGCCATCGAAGCCTTTGGGTCATACTCATTCTTCAAATCATTCACAGTTGCAGCAGAAGCTGCATTCTGGGTCACCAACCACTTCATCGAAGCAACTTCATATTCCTTCTGATACTAAAGCTCAAGCACAGGTTTCACCAGTTTCATCAGGCCAGTTGTTGTCATCTCCACCACCAGCTGTTATTGCTTCTAACCAACATCAGCTGCAGCCACAAAGTCAGTCTAAGAAAATTAATCATACTCAAACCAACGTTCAGAGAATCTTGCCACTAAACCATCCTGTTCATTCTGAGTCATTAAAGTCTGATCCAATTCAAGCTGATCAGCAGCCTGCAAACAGTTTTTGCAAGGGTAGCGCATGTGCTACAGTGACACAGAGTTGTATGGACCCTGTTACTGCTGTACCAGTTATTGCCACTGTATCTTCTCAGTGGAAAGCAGCTGAATCACCATTTGATTCAACTGTGAACAATCAAACCACTCAAATGAGTTCCTTGGGAAGTGCACCTGCTGGAAATTCCACTGGAAATGAGCAACCGACAATTAGTCAAGGGTTGGAGCCAAGATCTGTTAGCTTGACTTGTCATGCACATAATTCTGATACACAGTGGCAAAAACGTCAGGTACAACCTCTCCAACAGTCATCACAACCCATCCTATCTCAGCAGCCATATCAGACTGAGCAGCAGCAACAGCATGAGAAAGAAGAATATTCTCCCAAAGATATTGTTTTACAACCTCAACAACATATGCCGCATCTACAATCAGGGCAGAACAGTATGTTTATCCAGCCACCTAATTCTAAAGTTGAATGA 5931 0.4313 MNGYKSGSALLVNAEVDSMGGVVDGGIGIGLKISPRRAAIEKAQAELREEYDAREERRRELEFLEKGGNPLDFKSGNAASVSVQSTSITDQPHEQFVTSEAKGSFALTASPHADSVDSSARPGAPLASEPNTADNLQLFDGENELPDTERRCLNRRNNIAVSEQSSQIDGSQNAKETEDSAIFRPYARRNRSRPIHGPRGPSREAKGLLLETNNQKNPNLPTISKPEPSSLNCGIGAKSLTTNNTLNDEFVGIRDHQSTIGSASVPKDKLDITVNINLKENRETLPSEDNTVQNPILMATGEANVVELSKPIGVVNSDSPSHRPTTKAENGPYDCQPNGFGNVEVDRKSVTNEGQNNIARLGKKSFGLGSSCTQTSFGRHVNNDSDMCTNTKSVDANENTMEQTFTLENKLKSANCEFVKDRHKTKNGAIVSNEHDADCPDHSGSDNIIKAEEDFHINSSSMSNIKGVHNDSTTPKADTDTVLVDQSNSVKESSSERHQVPVDVSLSESPQTVLAEKVKSATSDDQPCAMHNMKLVDKAREDSILEEAQIIEAKRKRIAELSLRSLPTQNHRKSHWGFVLEEMAWLANDFAQERLWKIAAAAQLGHRAAFTCMSRFEKLNKQLETRVLSHKIAKAVMQFWQSAELLLDNDVENVDANEAIRDQRRNYNMLPPETTTLLEGQNPVKRPALKVDAYALRFIKANRSHGISSEAEAPTTPEKIFDSSTVDMSWDEHLNEESLFYEVSPTAVQTYRKAIESHFHHFEKTGSSIQEEIETSVYNTTAEFGSQENAYDEEEGENSTYYLPSVYEGNKSSKSAQKKHKILKSYTPRCSDAGADLPYVHYTTGTQPSMMFGKRPPSLNVGSIPTKRMRTATRHRVVSPFTNIGTAQAQAKADASSGDTNSFHDDQSTLHVGPLIQKGTEVESVADFEKQLSYDSAETFLKTKKKKAKTLGSMYDQGWQLDYVVLNEQQRDQSKKRGDSHHFESIGSGGKATCLYGQHNGKKPKVMRPLDSPLDSIVPLSNSIPSPAASQMSNMSSPNKFIKIISGRDRGRKAKSLKTSAGQPGSGSPWSLFEDQALVVLVHDMGPNWELVSDAINSALQIKCVFRKPKECKDRHKILMDRTTGDGADSAEDSGSSQSYPSTLPGIPKQGSARQLFQRLQGPMEEDTLKSHFEKIIKIGQKQHYLKNQIDNQDSKQVVAAHNSHVIALSLTSPNNLNGNLLTPLDLCEAEETNPDVPAVGYQGSHPGGLTLPHQGSIQSTHPTSGVNSSLPGSSGMALGHNLSSSSGSAITSVRGGRYGIPRNSPTPMDEQQRVQYNQMLPGRNIQQSISVTGTLSGSDHGRMLPGGNGIGIMGGINKAMAMSRPGFQGLASPSMLNSGSMISSSMVGMPSPVNMHSGVGPGPGNSILRPHETLHMMRPGHNPEHQRQMMVPELQMPVTQGNSQGIPALCGLSSSFSNQTTPAVQPYPGHAQQSHQLSQQQSHLSNPRPHLQGPSHTNSQQQTYAVRLAKERQMQQRYLQHQQQLAASNALLPHVQAKSQLSISSTPLQNNSQVQPQNSSQQVPHSPITPSSPLTPMSSQLQQQKLHQSQPGFSRNPPASGLTNQVAKQRPQHPPQQPPPQQQYQQSGRQHPNQRHNVQSQQQAKLMKGMGRGSMLVHPNLSVDASHLSGLSLPVGSQTGEKGDQILHMMQGQNIYPGSGLNPNQPSKPLGHTHSSNHSQLQQKLHSGSPTTSSKQLHIPSDTKAQAQVSPVSSGQLLSSPPPAVIASNQHQLQPQSQSKKINHTQTNVQRILPLNHPVHSESLKSDPIQADQQPANSFCKGSACATVTQSCMDPVTAVPVIATVSSQWKAAESPFDSTVNNQTTQMSSLGSAPAGNSTGNEQPTISQGLEPRSVSLTCHAHNSDTQWQKRQVQPLQQSSQPILSQQPYQTEQQQQHEKEEYSPKDIVLQPQQHMPHLQSGQNSMFIQPPNSKVE* 1977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1623 1648 - -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1122 1148 - -
Vra9g1068 1976 ProSiteProfiles HSA domain profile. 563 642 IPR014012 -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1694 1765 - -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1548 1648 - -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1907 1934 - -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1548 1612 - -
Vra9g1068 1976 CDD SANT 1069 1115 IPR001005 -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1440 1502 - -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 110 205 - -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1129 1148 - -
Vra9g1068 1976 Pfam HSA domain 569 607 IPR014012 -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1857 1889 - -
Vra9g1068 1976 Pfam Myb-like DNA-binding domain 1070 1118 - -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1250 1293 - -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1696 1765 - -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1907 1976 - -
Vra9g1068 1976 Coils Coil 37 60 - -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1954 1976 - -
Vra9g1068 1976 PANTHER CHROMATIN MODIFICATION-RELATED PROTEIN EAF1 A-RELATED 19 1969 IPR044798 GO:0035267
Vra9g1068 1976 ProSiteProfiles Myb-like domain profile. 1068 1120 IPR001005 -
Vra9g1068 1976 PANTHER CHROMATIN MODIFICATION-RELATED PROTEIN EAF1 A-RELATED 19 1969 - -
Vra9g1068 1976 SMART sant 1066 1122 IPR001005 -
Vra9g1068 1976 SMART bromneu2 564 629 IPR014012 -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 1239 1309 - -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 157 178 - -
Vra9g1068 1976 MobiDBLite consensus disorder prediction 313 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1068 Vra-Chr9 13552914 13581757 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1068 - - gmx:100811365 2962.94