Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1034 ATGGGAGAGGTAGAGGCTGCTTTCGTCCAAGAGGTGCAACACAGACCAAAGTTGGGTGTGATCGAAGCTGAAGAAATTCCTGTGATAGATCTGTCTCCAGTAACGAAGGAGGCAGTTTCAGATCCATGTTCCGTTGAAAGGTTGGTGAAGGAGATAGGGAGTGCGTGCAAGGAATGGGGTTTCTTCCAAGTAATAAACCATGGGGTGCCTGTGGTTCTGAGAGAAAACATTGAGAAAGCTTCAAGGATGTTCTTTAGTCAGAGTGTGGAGGAGAAGAGGAAGGTTAGGAGAGATGAGAGGAATGCCATGGGTTATTATGACACTGAGCACACCAAGAACGTTAGGGACTGGAAAGAAGTGTTTGATTCTGTAGCCAAAGACCACACTCCGGTTCCTCTCACTCCTGATGAACACGATGATCGACTCACTTACTGGACTAATTCCAATCCTCAGTACCCTCCACACCTCAGGAGTACAATCACAAAGTATGTTGAAGAGACGGAGAAATTGTCCTTGAAATTAATGGAGCTTATAGCTTTGAGCTTAGGCCTTGAAGCAAAAAGGTTTGAGGAATATTTTGTGAAAGATCAAACTAGCCTTTTTCATCTTAACTATTATCCTACATGCCCTAGTCCACACCTAGCCCTTGGTGTTGGTCCACACAAGGATATCGGAGCTCTAACCGTTCTTGCACAAGATGAGGTTGAAGGATTAGAAGTGAAACACAATGGAGAATGGATAAGAATTAAACTCATTCCAAATTCCTTCATTATCAACCTTGGTGATATTGTTCAGGTTTGGAGTAATGATGCATATGAGAGTCCAGAGCATAGAGTGGTGGTAAACTCTGAGAAAGAAAGATATTCCTATCCATTCTTCCTCTTCCCTGCACAGGAAACTGAGGTGAAGCCTATGGAGGAGTTGATAAATGACCAAAACCTTTCCAAATATAGGCCATACAAATGGGGCAAGTTTCTTGCTCACAGATTTAGCACCAATTTCAAGAAACGACTGGGGGAAAACATTCAAATATTACATTACAAGATTAAATAA 1053 0.4245 MGEVEAAFVQEVQHRPKLGVIEAEEIPVIDLSPVTKEAVSDPCSVERLVKEIGSACKEWGFFQVINHGVPVVLRENIEKASRMFFSQSVEEKRKVRRDERNAMGYYDTEHTKNVRDWKEVFDSVAKDHTPVPLTPDEHDDRLTYWTNSNPQYPPHLRSTITKYVEETEKLSLKLMELIALSLGLEAKRFEEYFVKDQTSLFHLNYYPTCPSPHLALGVGPHKDIGALTVLAQDEVEGLEVKHNGEWIRIKLIPNSFIINLGDIVQVWSNDAYESPEHRVVVNSEKERYSYPFFLFPAQETEVKPMEELINDQNLSKYRPYKWGKFLAHRFSTNFKKRLGENIQILHYKIK* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1034 350 Gene3D - 1 337 IPR027443 -
Vra9g1034 350 SUPERFAMILY Clavaminate synthase-like 8 335 - -
Vra9g1034 350 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 128 IPR026992 -
Vra9g1034 350 PRINTS Isopenicillin N synthase signature 52 69 - -
Vra9g1034 350 PRINTS Isopenicillin N synthase signature 221 242 - -
Vra9g1034 350 PRINTS Isopenicillin N synthase signature 256 282 - -
Vra9g1034 350 Pfam 2OG-Fe(II) oxygenase superfamily 200 296 IPR044861 -
Vra9g1034 350 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 341 - -
Vra9g1034 350 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 2 341 - -
Vra9g1034 350 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 296 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1034 Vra-Chr9 13025569 13031754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1034 25 318 Glycosyltransferase AT5G59530 32.039 8.47e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1034 - - gmx:100810801 526.554