Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1017 ATGAAGGCTCTCACCAGTTCTTGTTCTAAGGCCGTCGTCGATACTCTAGGATCTTTGCCTCCCAGAGTTGCCATTCATGTTTCTGATAGACCCGAATTCTTCCTCTCTACGCGTCCAAGGAAAGAAAAGAAGGGTTGCAACTTATGGCTCCTCAAAGTTGTTCCCATCAAGGGCGTTTTTCCAGTTCATGCAGTTCCATCGAAAGACCAGGTGGACTTGGAAACTGCAGAACCGGAAGCTCAAAACAATGAACAAACAAATGAATCGAAGTTTGTTCGTGTAGCATTTGAGTTACAAAAGGATTGTGACTTCGGAGAACAGTTTCTTATAGTTGGAGATGATCCTACGCTTGGTTCATGGGACCCTTTAGAAGCATTGCCGATGACATGGTCTGAAGGACATGTATGGACTGCTGAGCAGGATATGCCTGTTGGAAAGTCAATCCAGTTCAAGTTCATATTGAAAGGAAAAGAAGGTGATATTATTTGGCAGCCAGGACCAGATAGAGTCATCAACACTTGGGAAACCGTGAATACAATAACTGTTTGTGAAGATTGGGAGAATGCAGAACTTCAGAAAATAACAGAGGAAGATCAGCTTGCTGAACCGGATAAGGAACCCCAGATTGACTCTGAAGTGTCTGCTTCTGCTGAAATTTTGGATCTGGATTCCAATGCATCTGAAATAACGGCTGTTGAGATACCACTTACTGCACCAGTCACTGATAATGGTATTGTTGCAGAAAATATAATTTCCCATGAGGATCTCATCAAGAATACTAGCAGTAAATGGAATGAAAAGATTGAGCCGAGTGAAGAATCAGCTGATATTGCAGGAAATGATGATATAGTTCTTGATCTTGGAAACAATGGAAGTGCTGCATCACTCGAGAATGAGGAAGAGACAATTGTGGAAAGCAGCTTATTATTTGATTTTGAAAGCGTTCCTGTTCTTGTACCTGGTTTAACAATACCATCAATTGAGCCAACAAATGAGGCAAGCCAAGGTGAAAAAGTTCAAGAAAAGACTACCAAGGACATTTCAATTGAAGCTTCTGAAACTGATCAGGATCAGAATCCACCCAAGTTGAGTAAGGAGCAAGATGGCACTCCCCAGGAAATAAAAGCGACAATCAATAATTTGTCCCCAGATACAGAAGACAATTCAAACTATGAACCAGAAGATGGCACTCTCTTGCAAAATCAAATAAAAAGGGGCCATGAAAGCGTAATGAAGTTTCTTTCACTACTAGGATTACGTGGAGGGTCAAACTTTATGGAACCACTGGAATAA 1293 0.4138 MKALTSSCSKAVVDTLGSLPPRVAIHVSDRPEFFLSTRPRKEKKGCNLWLLKVVPIKGVFPVHAVPSKDQVDLETAEPEAQNNEQTNESKFVRVAFELQKDCDFGEQFLIVGDDPTLGSWDPLEALPMTWSEGHVWTAEQDMPVGKSIQFKFILKGKEGDIIWQPGPDRVINTWETVNTITVCEDWENAELQKITEEDQLAEPDKEPQIDSEVSASAEILDLDSNASEITAVEIPLTAPVTDNGIVAENIISHEDLIKNTSSKWNEKIEPSEESADIAGNDDIVLDLGNNGSAASLENEEETIVESSLLFDFESVPVLVPGLTIPSIEPTNEASQGEKVQEKTTKDISIEASETDQDQNPPKLSKEQDGTPQEIKATINNLSPDTEDNSNYEPEDGTLLQNQIKRGHESVMKFLSLLGLRGGSNFMEPLE* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1017 430 MobiDBLite consensus disorder prediction 353 397 - -
Vra9g1017 430 MobiDBLite consensus disorder prediction 324 397 - -
Vra9g1017 430 SMART CBM_20_2 91 183 IPR002044 GO:2001070
Vra9g1017 430 MobiDBLite consensus disorder prediction 338 352 - -
Vra9g1017 430 PANTHER BLR6771 PROTEIN 1 380 - -
Vra9g1017 430 Pfam Starch binding domain 92 179 IPR002044 GO:2001070
Vra9g1017 430 Gene3D Immunoglobulins 89 187 IPR013783 -
Vra9g1017 430 CDD CBM20 93 186 - -
Vra9g1017 430 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 86 188 IPR002044 GO:2001070
Vra9g1017 430 Coils Coil 429 430 - -
Vra9g1017 430 SUPERFAMILY Starch-binding domain-like 89 185 IPR013784 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1017 Vra-Chr9 12663428 12666817 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1017 - - vra:106774358 862.448