Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1016 ATGGAAAACAAGCCAGGATGGAGGGCCATTTCTTACATCTTAGGATATCAAATAGTTCAGAGGATTGCAACATTAGGTATGATGGGAAATCTCATGGTGTATTTGTTGCAATTTTTCAACTTGGGTCAGGTTGCTGCTGCAAATGTTCTTGCCATAGTGGCAGGAGCTAGCAATTTAATAGCTGTTATTGGTGCCTGTGTTGCTGATGCTTATCTAGGGAAATTCAAAACCATTGCTATTTCATCATTTGGAGTACTTGTGGGAATGGTGATACTAACACTAACAGCTCTGCCACAACTTCATCCTCCAAGTTGCATTTCAACGGAGCACTGTGTTCCTCCAACGAGTTTTCAACTTGGGTTCTTGATTTTAGGCAATGGTTTGCTGGCTCTGGGCACAGGGGCGATGGGACCATGCGCTATTCCCTTTGCGTTTGATCAGTTTGATTCAACTTGCTCTGACGGAAGGAAAGGAATGAGCAGATTCTTTAATTGGTACTTCACTTCACTGACAGTTATCCAGTTAAACAGTCTGACAGCAGTAGTTTACCTCGAGAACAAAAGCTGGATCTTGAGTTTTGGAATGTTAACTCTTCTCATGTTATTCTCAATTATCATACTTTTTGTTGGAGCTAGCGTTTATGTTTATATTCCACCAGAGGGGAGCATATTTTCTGGTATTGCTCAGGTGTTTGTTGCAGCTTATAAGAAGCGTCACCTCAAAATTCCAGTAATAGAAGATGAGCTTCTTTACTATGATCCCCCGGTGGATGCAAAAACACTGCTGAAGATGCCCTCAACCCAACAACTCACGTGCTTAAACAAAGCTGCCCTGATAGGAGACAACGAACTTGACGCAAGAGGTAGTGTAAAAAATCCATGGAGGCTTTGCAGCATTCAGCAAGTGGAAGAAGTCAAATGTTTGATAAAAATGCTTCCAATCTGGGCTTCTGGTATTCTTTGCTTGATTCCCGTAATACAACAAGGCACCTTCCCAGTATCGCAGGCCTTGAAAATGGACCGTCATCTTGGAGCAAACTTCACACTTCCACCTGCAACCTACAACGTGGTGTCTCTGGTCACCGTTATCATATTCCTTCCATGCTTTGACCTCTTTCTGCAACCAGCATTAGCAAAAGTGACCAAAAACGAGGAGGGTCTGACGAGCCTTCAGAAGATAGTGATCGGTGATATATGCTCGGTTCTCACAATGCTGTGTGCTGGCTTCGTGGAGTGGCGAAGAAGGGGTGTGGCAATCTCACATGGTGCACCTGATGGGGTTGCCCCCATGAGTGCAATGTGGCTGGCACCACAATTTGTGTTCTTGGGATTCTGTGAGATACTTACCGTTGTCGGACACACTCAGTTCTACAGCACTGAGTCACCAGAGAATATGAAAAGCATAGGAAATTCGTTGCAGTATCTTGTGATGGCATTTTCAATTTACGTTGGCACGTTGGTGGTGAATGTGGTGAACAAAGTAACTCGAAAACATGGTGGAATTGATTGGCTCAACGATGACATCAACGCTGGCAGATTGGACTATTATTACTTCCTCCTAGCAGGATTTGCTGCTATAAATCTTGTCTACATCTTGTTATGTGTTAAATGCCACCATTACAAGGTGGTCATTAATAACAATCGATTTGAATAA 1653 0.4325 MENKPGWRAISYILGYQIVQRIATLGMMGNLMVYLLQFFNLGQVAAANVLAIVAGASNLIAVIGACVADAYLGKFKTIAISSFGVLVGMVILTLTALPQLHPPSCISTEHCVPPTSFQLGFLILGNGLLALGTGAMGPCAIPFAFDQFDSTCSDGRKGMSRFFNWYFTSLTVIQLNSLTAVVYLENKSWILSFGMLTLLMLFSIIILFVGASVYVYIPPEGSIFSGIAQVFVAAYKKRHLKIPVIEDELLYYDPPVDAKTLLKMPSTQQLTCLNKAALIGDNELDARGSVKNPWRLCSIQQVEEVKCLIKMLPIWASGILCLIPVIQQGTFPVSQALKMDRHLGANFTLPPATYNVVSLVTVIIFLPCFDLFLQPALAKVTKNEEGLTSLQKIVIGDICSVLTMLCAGFVEWRRRGVAISHGAPDGVAPMSAMWLAPQFVFLGFCEILTVVGHTQFYSTESPENMKSIGNSLQYLVMAFSIYVGTLVVNVVNKVTRKHGGIDWLNDDINAGRLDYYYFLLAGFAAINLVYILLCVKCHHYKVVINNNRFE* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1016 550 PANTHER PEPTIDE/NITRATE TRANSPORTER 5 545 - -
Vra9g1016 550 Pfam POT family 75 504 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra9g1016 550 Gene3D MFS general substrate transporter like domains 1 545 IPR036259 -
Vra9g1016 550 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 5 545 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra9g1016 550 SUPERFAMILY MFS general substrate transporter 1 537 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1016 Vra-Chr9 12656030 12658146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1016 1 550 Organic Solute Cotransporters AT1G69870 45.683 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1016 - - vra:106773369 922.539