Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1011 ATGGCGAGGCAAGAAAAGTGGTCTACTTTTGAGAAGAAAATTTTGTCATTAAAAGCTCGAATTCGTTATCTAATCCGCCGCTATGGGGCCCTAACTTTCATTGCTGCATTGCTTGTAAGTTACACATTTATGGAGATCGCGGTGTTGGCAATAATGATGGATTATCTCACAGAGAAACTTCGAATGCGGAATCAACGGATAGCTGCTATTGTCATAAATCTTGGAGATGCTTTATCATCTCTCTTTTTTGTTGTTGTTTCTCTAATCTCGCAAACATATACGGGTTCTTTCACTATGATCACATTGTGTGCTGCAGCTTCCATCGAGGGTTTAATGCTACTATGGACGTCTACATTGCGAATACCTTCAGCAATTGGTTCGGCCTTTGCGGCCATAGTCTTCCTTGGAATTGGAAAAAGTGGTCAAAAGCTTTCAGAAAATTTCCTTGAGCATCAGTTGGAAGAAAAATTTAAACCAAAGAAACAAGGGGAAAAAGATGGAAGCACACAAGACAGAAATGAGAGAAGCCTCGGCCATACAATTTTTATTAGTATCTGGTTATTCTTTCCACTGGTTGTTGGATATATCATAGCATTTTGCCTTGACTTCATCTTCTATGATGCAAAATTCAGGGACGTATTCAGATTTTCTGCACTTTTAATGGGAGCGACTCATCTGTTGTTCCTCATCGGTTCTTTGGGGTATAGCCGCCAAGAATTACCCGTTGAAAGCGATTTAAGCAAGATCCATAGAATCTTCATCACAGCTTTACGGAAACTGAGTTTAAAATATCCAACCTCACCAAATTCTTATTACTGGAAGGGCTACAAGCAGCAACACACGTATAATTGTGGTGAAGGAGTAAGGTTATTGCCACGAGTTCCACGGCTATTCAGGTGGTTGGACAAAGCGGCCATAGTTAAATCAGAAGAAGAAGAAGAAGAAGATCCAAGACATCATAGAAAGAGTCTTGAGACGCAAGAAAAGAAAAAGAAGATTTGCACTGTGAAGGACGTGAGAGATGTCAAAAGCCTTGTTCATATGTTTTACCTTGCCCTTACCATCTTTCCTTATAGTTTACTCATTGCCTCTGGGAACACTTTCTTTGTTGCCCAAGCAAGTGTGTTGGAACCAGTTATGAATAAAAGAGGTAATAACGATATCTCTATTCTATTCTTGATCGAATCCGTGGCGACTAACATGTCAGAGTTTGCTTGTTTTCTCATCAGTCTTTCCTTTCGAAAAAAACAAAAATCTAGAGTTTCAAGTTTAACGTTGGAAAGAAAAGCAGCGACAATCATAAGGATTGGATTTGGCATTACGTGTGCAGTAATATGCGGCATCATAGCATGGCAAGTAGAGATTCGCAGGTTGTCGTCAAAGTTGAATACAACAGTGGCTTTGGTTCCGCAATTTGTGTTACTAGGAATGACAGAGGGACTTGTTGATGGGGGAATAGAGAGATTATTCGATGACCATGTAGCAAAATCGTTGTCGAATTTTGAGGATTCGTTTAGTGAGTTGGTGGTTGGTGGTGGAAAACTTCTGATTATACCAATTGTGTGGATTTTCAGCGGGTGGATCAAGGAAACAATCGAAACTAGCCATTTGGACAGGTACTATCTGATGTTGGCGATAATGAACGCTGTGCTGCTTCTAGCTTTTGCATACTACTCCGTCACCTATGCGTACAAGGAAGTGTGTCCCGAAGATGAGAAGGTAAGCACAGAGGAAAGAGTGGATGATGCACATCAACCAGACTCAGAAGACAGCTATCAGGAAAATACTCTCCCATTGAAAATGGGAAAGAGTGGATCATTCCCATAA 1827 0.4061 MARQEKWSTFEKKILSLKARIRYLIRRYGALTFIAALLVSYTFMEIAVLAIMMDYLTEKLRMRNQRIAAIVINLGDALSSLFFVVVSLISQTYTGSFTMITLCAAASIEGLMLLWTSTLRIPSAIGSAFAAIVFLGIGKSGQKLSENFLEHQLEEKFKPKKQGEKDGSTQDRNERSLGHTIFISIWLFFPLVVGYIIAFCLDFIFYDAKFRDVFRFSALLMGATHLLFLIGSLGYSRQELPVESDLSKIHRIFITALRKLSLKYPTSPNSYYWKGYKQQHTYNCGEGVRLLPRVPRLFRWLDKAAIVKSEEEEEEDPRHHRKSLETQEKKKKICTVKDVRDVKSLVHMFYLALTIFPYSLLIASGNTFFVAQASVLEPVMNKRGNNDISILFLIESVATNMSEFACFLISLSFRKKQKSRVSSLTLERKAATIIRIGFGITCAVICGIIAWQVEIRRLSSKLNTTVALVPQFVLLGMTEGLVDGGIERLFDDHVAKSLSNFEDSFSELVVGGGKLLIIPIVWIFSGWIKETIETSHLDRYYLMLAIMNAVLLLAFAYYSVTYAYKEVCPEDEKVSTEERVDDAHQPDSEDSYQENTLPLKMGKSGSFP* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1011 608 MobiDBLite consensus disorder prediction 571 589 - -
Vra9g1011 608 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 47 558 - -
Vra9g1011 608 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 47 558 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra9g1011 608 Pfam POT family 163 501 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra9g1011 608 Gene3D MFS general substrate transporter like domains 21 569 IPR036259 -
Vra9g1011 608 MobiDBLite consensus disorder prediction 571 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1011 Vra-Chr9 12554931 12566662 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1011 28 577 Organic Solute Cotransporters AT3G54450 22.971 6.42e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1011 - K14638 ccaj:109818666 522.702