Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1009 ATGGCGCTGAAAGAAAACGGTCCAGAAATAAACTTCTCATTCGCTCTAATGAAGAATTTGTTGCATCAACTCCGTCATCTATTCTTCAACTCTAAGACCCATCTACTCTGCATCGGCGCTTTGTCTGCAAGCTACACCATTGTGGAATTCTCGGTGGTGTCTACTATGATGGATTACTGGAAATATTCAGAGGTGGAGGAGGATCTACGAAAAGCTGCTGTCTTAACAAATCTACAAGATGGTCTATCGTCTGTCCTTTCCATTTTTGCTTCTTTAATCTCCGAATCATATACGGGTCCCTTGACTATGATCACAATTTGCGCTGCAGCTGCCATCCAGGGTTTAATGCTACTATGGACATCGGCTAATTCAGTGTCTGGTGCGCTATATGCAGCCATATTGTTTCTTGCATTAGGGAAAAGTGGCCAAACGCTTTTAGGAAGTTTTCTTAAAAATAAAGTGGAAGAGATACTTGAAGAAAGAGAAAAAAGTGAAATAAAGGATGGAAGCACAGAAAAACAAAATGGGCAAGACCTCGTACGTACAATTCTTACAAATACGTGGTTGTTAGTTCCGTTGGTTGTTGGATACGTGGTAATAGTGTTTGCTGACTTTGCCAATCAAGATTACTATTATCTTTTCAGATCCTCTGCAATTCTCATGGGAGGGTGCTATCTTTTGTTCCTCTTTGGTAGGACGAAGTATAGTCACGAACAATTACTTGATGAAAGCAATCTAGGGAAGATCTTTAGAATCTGCAAAGCAGCTTGTGGAAGACGAAGATCAGATTATCCAACGTCTCCGAATTGCTATTACTGGAAGGGTAATGTGCGGACCAATTTATGTTATGACCACGGTAAAGGACTGAGATTAAAGCCACGAGTTCCACGGCTATTCAGGTGGTTGGACAAAGCAGCTATACTGAATCAAAAAGATTCTATATATCCTGAGGTGAGTCCTGACACGCAAGAAAGGAATGGGAAGGTTTGCACAGTAGAGGACGTGAGGGAAGTGAAGAGCTTTGTTCCTATGATATACCTCTGCTTTACCTTCTTTGCTTACAGTTTACTCGTGGCTACTGGGAACACTTTTTTTGTTGCTCAAGCAAGCAATATGAAACCTACCAAAGGTTATGATATCTCTAGACTCTTTTTGATCAAAACCGGCATGAGAAAAGTGTCGCAATTCATCTTCTTTTGGATCGTGACTGGCTTGCGTAGTATGAGAACTGCAGGCTTTACGTCGAAAAGATTCACAGTAACGACTTCGATTATAAGCATTGGTTTTGGCATGGTGTGTGCCGTAATTTGCTGCGTCGTAGCGTGGAAAGTCGAGTTACAGAGATTGTCATTGACAAAATATGGACAGGAAGAACTGAAAAGCCCAACCAGAGCCTTAGTTCCGCAGTTTATATTGTTGGGAATGACGGAGGCACTTGTTGAGGGGGGTTTAAAGCTTTTATATGTTGCCCACGTAGAAAAAGCACTGTGGAGTTTTACTGATTCGTATATTGAATTACTGAATGGTATTGGCAAACTCCTATTTTTTCCACTGGTCGTAACTTTCAGTGGCAGCTGGTTCAAGGAGAGTATCGATACTTCCCATGTAGACAGATTCTATCTCATGTTGGGAATATTGAACGCTGCCCTGCTTCAAATTTTTGCGTACTACTCTTTCAAATACACATACAACGAGATATCTCCCGAGGATGACCATGCTGATCAACCAGAGGCTTGCAATCAAGTATTTGATGAAGAAAACTTTGAAGACCATGTTAAAGTAAATGTTGAAGAAAACAAAGAAGACCAGGTTGAAGAAAATGTTGACGATGATAAAGAAAACTGTCATTCAACACTGTTTTGTATTATGAATAATATCTCTGATCATTTTTGA 1893 0.4052 MALKENGPEINFSFALMKNLLHQLRHLFFNSKTHLLCIGALSASYTIVEFSVVSTMMDYWKYSEVEEDLRKAAVLTNLQDGLSSVLSIFASLISESYTGPLTMITICAAAAIQGLMLLWTSANSVSGALYAAILFLALGKSGQTLLGSFLKNKVEEILEEREKSEIKDGSTEKQNGQDLVRTILTNTWLLVPLVVGYVVIVFADFANQDYYYLFRSSAILMGGCYLLFLFGRTKYSHEQLLDESNLGKIFRICKAACGRRRSDYPTSPNCYYWKGNVRTNLCYDHGKGLRLKPRVPRLFRWLDKAAILNQKDSIYPEVSPDTQERNGKVCTVEDVREVKSFVPMIYLCFTFFAYSLLVATGNTFFVAQASNMKPTKGYDISRLFLIKTGMRKVSQFIFFWIVTGLRSMRTAGFTSKRFTVTTSIISIGFGMVCAVICCVVAWKVELQRLSLTKYGQEELKSPTRALVPQFILLGMTEALVEGGLKLLYVAHVEKALWSFTDSYIELLNGIGKLLFFPLVVTFSGSWFKESIDTSHVDRFYLMLGILNAALLQIFAYYSFKYTYNEISPEDDHADQPEACNQVFDEENFEDHVKVNVEENKEDQVEENVDDDKENCHSTLFCIMNNISDHF* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1009 630 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 73 557 - -
Vra9g1009 630 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 73 557 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra9g1009 630 Coils Coil 594 614 - -
Vra9g1009 630 Pfam POT family 214 513 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra9g1009 630 SUPERFAMILY MFS general substrate transporter 189 557 IPR036259 -
Vra9g1009 630 Gene3D MFS general substrate transporter like domains 30 569 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1009 Vra-Chr9 12464539 12468550 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1009 41 575 Organic Solute Cotransporters AT2G38100 22.968 2.22e-21 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1009 - K14638 var:108346687 1135.94