Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1008 ATGGCGCTGCAAGAAAACAAAAGTTCAGAAAAAACCAATTCAAGTGGTGTTACGAAGAAATTCTGGCTCCGCTATCTATTCGACAACTTTAATACCCTACCTTTCATTAGCGCTTTGGTTGTAGCCTACAAATATGTGGAAATCGCAGTGGTATCTATATTGATGGATTACTTCAACGATTCAACGGAGGCGAATCAACGAATAGCAGCCATTGTTACAAATCTTCAAGATGGTCTATCATCGCTCTTTGTAGTTATTGTTTCTCTAATCTCAGAAGCATATACAGGTTATTACACTATGATAACGTTTTGCACTGCAGTTTCAATAGAGGGTTTAATGCTACTATGGACATCTGCATCATCAACCAAACCTTCCACATTTCGTGCGGTCTATGGAGCCATATTTTTCCTAGCATTAGGAGCCAGTGGTCAAAAGCTTTTGGAAAATTTTTTTGAATACCAATTGGGCGAGAAAATTAAAGCCAGACATGGCAGTGAAGCAGTCCGTAGTGGAAGCACGGAGAACAAAAAGGAGCAAGATTTCACGGATAAAGTGATAATTAAAACTTGGTTGTACGGTCCATTTGTTGTTGGATATGTCATTACAATTTGTTTTGCCTTCATCAACATCGACATCCATACAACGTACGAGCACTGGTTCCGATTCGCGGCACTTCTTATGGGTGGGACTTTCATGTTGTTCCTCGTTGGATCGGAGTGGTACAGCCGCGAAAAATTGCCCATCGAAAGCAATCTACACAAGATATACAGAATCTTCAAAGCAGCTTTAAGGAAACGACATGAAAAGTATCCAACCTCGCCTAGTCGCTATTATTGGAAGGATAGTAAGCGAGATGATTCTTATGAATACCATGAAGGAGTAAGGTTACTTCCACGAGTTCCACGTCTGTTCAGGTGGTTGGACAAAGCAGCTATACTTGAAGCAGAAGATTCCACAGTGAGTCTGGAGTTGCAAGAAAAGAATGAGAAGCTTTGCACTGTAAAGGAAGTGAGGGATGTGAAGAGCCTTGTTCCCATGTTTTACCTGTGCTTTGCATTCTTTGGCTACAGTTTACTACTAGCCACTGAGAGCACTTTCTTTGTTTCGCAAGCAAGCAACATGAGGGCACATTTTACAACCAATAATAATGATATCTCTATTCTCGTTTTGATCATGGAGGCCACGAGTGATGTGTCACAATTCATCTGCTTTCTTATTGGTCGTGCATTCCGACACTTTACAAAATTCAGTTGCTTCGATAATGTGTGCAACAAGAAAGCGGCAATTGCGAGGATTGGTTTTGGTATGGTTTGTGCAATAATTTGTAGCCTCATGGCATGGAGAGTTGAGGTTGGTAGATTGAATGTAAGCAAGCAAATGGAGTACTGGGATGGTAGAAACTCCACCGTGGCCTTGGTTCCGCAATTTTCAGTATTGGGAATCTCAAAGGGGCTTGTTGAAGGTGGAATCCAGAATTTGTTCCACGGGCACGTGGTGAAATCAATGTGGAGTTTTGATGATGCATACGAGAAATTGGTGATTGGTAGTGGAAAACTCATGATCATACCACTTGTCTTGTGTATCCCTAGTTGGTTCGGTGATACTTTGAACTCAAGTCGTTTGGACAAGTTCTATCTGATGTTGGGGATATTGAACGCTGCGTTTCTTCTGGTTTTTTGTTACTACTCCTTCAGATATGCCTACAAAGACGTACTTCCCCAAGATGATCCAGCAGTTGAAGATGAAAATGTGGATTTCGTTTCACAAAGTTCCGTTGAGATAGAGTCCAAAAACCATAATACTGACACAGACTAA 1815 0.4127 MALQENKSSEKTNSSGVTKKFWLRYLFDNFNTLPFISALVVAYKYVEIAVVSILMDYFNDSTEANQRIAAIVTNLQDGLSSLFVVIVSLISEAYTGYYTMITFCTAVSIEGLMLLWTSASSTKPSTFRAVYGAIFFLALGASGQKLLENFFEYQLGEKIKARHGSEAVRSGSTENKKEQDFTDKVIIKTWLYGPFVVGYVITICFAFINIDIHTTYEHWFRFAALLMGGTFMLFLVGSEWYSREKLPIESNLHKIYRIFKAALRKRHEKYPTSPSRYYWKDSKRDDSYEYHEGVRLLPRVPRLFRWLDKAAILEAEDSTVSLELQEKNEKLCTVKEVRDVKSLVPMFYLCFAFFGYSLLLATESTFFVSQASNMRAHFTTNNNDISILVLIMEATSDVSQFICFLIGRAFRHFTKFSCFDNVCNKKAAIARIGFGMVCAIICSLMAWRVEVGRLNVSKQMEYWDGRNSTVALVPQFSVLGISKGLVEGGIQNLFHGHVVKSMWSFDDAYEKLVIGSGKLMIIPLVLCIPSWFGDTLNSSRLDKFYLMLGILNAAFLLVFCYYSFRYAYKDVLPQDDPAVEDENVDFVSQSSVEIESKNHNTDTD* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1008 604 Pfam POT family 215 505 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra9g1008 604 Gene3D MFS general substrate transporter like domains 4 572 IPR036259 -
Vra9g1008 604 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 46 562 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra9g1008 604 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 46 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1008 Vra-Chr9 12443988 12446364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1008 54 573 Organic Solute Cotransporters AT3G53960 25.953 2.32e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1008 - K14638 ccaj:109818666 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g1008 9 12443988 12446364 Vra9g1008 9 12443988 12446364 ECH