Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0982 ATGAGAGGATTGTTTCTCCCATGGAATCCATTGCGCTTCCACACTCTCACTTTTACATCCCTTCCAAACAGAGCCTTAACCCTCTCAGCTTCCTTGGAGTCCCTCTCTCAGGTGAGCGCGCGTGAGAGGAGGCGCGAGAGGAGCGAGAGAAGAGAGAGAAAGAGCGGCACCAACTGGAGGGAGGAGGTGGAGATGAAACTCATCGAGAAGCCGAAGAAGAAAGGTTCGTGGATGGACGAACTGAACCTGGACAACCTCGCCAAGTTGGGTCCTCAATGGTGGGTCATTCGTGTTTTGAGGATTAGGGGTCACGAAATCGCGCAACTCCTCGCTCGCTCCCTCGCTCTAAACTACCCCGACGTCGAATTTAAGATATATGTTCCATCCGTCAATGAGAAAAGGAGATTGAAGAATGGTTCCTACTCTGTTAAACCAAGGCAATTGTTCCCAGGATGTGTTTTCTTGAGATGTGTGATGAACAAAGAATTACATGACTTCATAAGAGAGTATGATGGTGTTGGAGGATTTATTGGTTCCACAGTTGGAAACACAAAGAGACAGATCAATAGACCTAAGCCATTATCTGCCGAAGATGTGGATGCAATCTTCAGACAAGCAAAAGAAGAACAAGAAAAAACTGACCAAGCTTTTGAGGGAGAAGAGAAAAGAGCTGCTCTAGTCTCTGGGATTCGTTATACAGAATTGGAACCCGATGATGTTTTGAATGCTATTGTTGATACAAAATCTAAAGGGAGGCATAGGAAAACTTCTGACCAGGTCACAGTCAAAGAGGCCTCTTCTAATCGAAACAAATATAAACTCCTTGTTCCAGGTTCCACTGTTCATGTTGTATCTGGAACCTTTTCAGGGTTTACAGGCACCCTCAAGAAGCTGAATCGAAAAACTAAAATGGCTACTGTGCATTTCACTCTATTTGGGAAAGAGAACATAGCAGACATAGATGTTAATGAAATTGGTCTGGAGACAAACCGTGGCCTGTAG 1002 0.4491 MRGLFLPWNPLRFHTLTFTSLPNRALTLSASLESLSQVSARERRRERSERRERKSGTNWREEVEMKLIEKPKKKGSWMDELNLDNLAKLGPQWWVIRVLRIRGHEIAQLLARSLALNYPDVEFKIYVPSVNEKRRLKNGSYSVKPRQLFPGCVFLRCVMNKELHDFIREYDGVGGFIGSTVGNTKRQINRPKPLSAEDVDAIFRQAKEEQEKTDQAFEGEEKRAALVSGIRYTELEPDDVLNAIVDTKSKGRHRKTSDQVTVKEASSNRNKYKLLVPGSTVHVVSGTFSGFTGTLKKLNRKTKMATVHFTLFGKENIADIDVNEIGLETNRGL* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0982 333 Gene3D - 91 208 IPR036735 GO:0006355
Vra9g0982 333 CDD NGN_plant 92 203 - -
Vra9g0982 333 SMART nusgn_4 90 206 IPR006645 GO:0140673
Vra9g0982 333 CDD KOW_NusG 275 325 - -
Vra9g0982 333 Gene3D - 275 326 IPR014722 -
Vra9g0982 333 SUPERFAMILY N-utilization substance G protein NusG, N-terminal domain 91 208 IPR036735 GO:0006355
Vra9g0982 333 SUPERFAMILY Translation proteins SH3-like domain 276 325 IPR008991 -
Vra9g0982 333 PANTHER RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG 22 326 IPR043425 -
Vra9g0982 333 PANTHER TRANSCRIPTION ANTITERMINATION PROTEIN RFAH 22 326 - -
Vra9g0982 333 Pfam Transcription termination factor nusG 92 202 IPR006645 GO:0140673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0982 - - gmx:100815839 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0982 9 11993016 11997564 Vra9g0982 9 11993016 11997564 ECH