Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0979 ATGTCCCTTAGGCGAATAATCAAGAGTTCAAATGCCTCCATCACATGCTGCTCTTCATTATATATACGATCCAATTCCATACCCTATCATCATCATCCAATTCACTCGTTGCTATCTACAAAGTCTCAGCATACCCCTTTTCAATCTTTCTCCTTCATGGGTTTAGTATTTGGAAAAATCAGCGTGGAGACCCCAAAATACGAAGTGATCAAATCCACAAGCGAGTACGAAATCCGCAAGTATGCACCCTGTGTAGTGGCAGAAGTCACATATGACCCATCACAGTTCAAGGAAAATAAAGATGGTGGCTTTATGGTTTTGGCCAATTACATTGGTGCTTTGGGGAAACCCCAGAACACAAAGCCTGAAAAGATTGCCATGACTGCACCAGTTATAACCATGGACAGTGGTGGGGGTGGTGAGAAGATTGCTATGACAGCGCCAGTTGTGACAAAAGATGGCGGTGGTGAAGATGGGAAGAAGAACAAGATTGTGACTATGCAGTTTATTTTGCCAGCTCTGTATGGGAAAGCTGAGGAGGCGCCTAAACCTACTGATGAGAGGGTTGTGATAAGAGAAGAGGGTGAGAGGAAATATGGGGTGGTGAAGTTTGGAGGTGTGGCATCAGAAGAAGTGGTGAAGGAGAAGGTGGAGAAGCTGAAGGTGAGTTTGGAGACTGATGGGTTTAAGGTGGTTGGGGATTACTTGTTGGCCAGGTACAACCCACCTTGGACAATTCCTATGTTTAGGACTAATGAGGTTATGATCCCAGTTGAATGA 780 0.4474 MSLRRIIKSSNASITCCSSLYIRSNSIPYHHHPIHSLLSTKSQHTPFQSFSFMGLVFGKISVETPKYEVIKSTSEYEIRKYAPCVVAEVTYDPSQFKENKDGGFMVLANYIGALGKPQNTKPEKIAMTAPVITMDSGGGGEKIAMTAPVVTKDGGGEDGKKNKIVTMQFILPALYGKAEEAPKPTDERVVIREEGERKYGVVKFGGVASEEVVKEKVEKLKVSLETDGFKVVGDYLLARYNPPWTIPMFRTNEVMIPVE* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0979 259 Gene3D Regulatory factor, effector binding domain 61 138 IPR011256 -
Vra9g0979 259 Gene3D Regulatory factor, effector binding domain 139 259 IPR011256 -
Vra9g0979 259 PANTHER - 54 259 - -
Vra9g0979 259 SUPERFAMILY Probable bacterial effector-binding domain 137 259 IPR011256 -
Vra9g0979 259 Pfam SOUL heme-binding protein 62 257 IPR006917 -
Vra9g0979 259 PANTHER HEME-BINDING PROTEIN-RELATED 54 259 IPR006917 -
Vra9g0979 259 SUPERFAMILY Probable bacterial effector-binding domain 53 133 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0979 Vra-Chr9 11945123 11946073 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0979 - - var:108347054 472.626