Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0972 ATGGAAATGGAGAATGATAACAGCTTCACACAACAGACTGCAAGGCCAAAATATGATTGTCTTCTATTTGATTTAGATGATACTTTGTATCCTCTCAATTCTGGTCTTGCACTTGCAACTCACCAAAATATCAAGGACTACATGGTGGAGAAACTTGGCATAGAACCAAGTAAAACTGATGAAATGACCAACCTTCTTTACAGTAACTATGGAACTACTCTTGCTGGTTTAAGGGCAATTGGATATGACTTTGATTATGAAGAATATTACAGTTTTGTTCATGGAAAATTGCCTTATGAGAACTTAAAGCCAGATCCAGTTCTGAGGAATCTCCTCCTGAGCCTTCCTTATAGGAAGCTTATTTTTACAAACTCAGACAAAGTCCATACGATTAAGGCACTGGAAAGACTTGGATTGGAAGATTGTTTTGAAGGAATCACATGCTTTGAGACCCTCAATCCCATCCACAAAGGTACTGTGTATGATGATGAAGAGAACAAAGGTTCAATGGCCACTGATCCAACACCAAAAACTGCTCTAAAATGCTCAGAAATATTTGACATCATACAACATTTTTCTCAACCTAATCCCACTGCAGTCCTTCCAAGGACACCAGTTATCTGCAAACCATCAGAACATGCCATTGAATTGGCTCTCAAGATAGCCAACATTAACCCAAAAAGAACATTGTTCTTCGAGGATAGTGTCCGCAACATCCAAGCTGGAAAACGAGTGGGTCTTCACACTGTGCTGGTTGGTAAATTCCAGAAAGTTAAAGGTGCTGACTATGCCATGGAAAGCATTCACAACCTTAGGAAGACAGTGCCTGAACTATGGGAAACTGAAATAACAGCACAAGTTATTGCATGCCCTGAGACTTAG 882 0.398 MEMENDNSFTQQTARPKYDCLLFDLDDTLYPLNSGLALATHQNIKDYMVEKLGIEPSKTDEMTNLLYSNYGTTLAGLRAIGYDFDYEEYYSFVHGKLPYENLKPDPVLRNLLLSLPYRKLIFTNSDKVHTIKALERLGLEDCFEGITCFETLNPIHKGTVYDDEENKGSMATDPTPKTALKCSEIFDIIQHFSQPNPTAVLPRTPVICKPSEHAIELALKIANINPKRTLFFEDSVRNIQAGKRVGLHTVLVGKFQKVKGADYAMESIHNLRKTVPELWETEITAQVIACPET* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0972 293 Gene3D - 83 279 IPR023214 -
Vra9g0972 293 SFLD C1.5.3: 5'-Nucleotidase Like 12 281 IPR010237 -
Vra9g0972 293 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 3 287 - -
Vra9g0972 293 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 12 281 - -
Vra9g0972 293 Pfam Haloacid dehalogenase-like hydrolase 209 252 IPR041492 -
Vra9g0972 293 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 205 252 IPR006439 -
Vra9g0972 293 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 3 287 - -
Vra9g0972 293 SUPERFAMILY HAD-like 17 279 IPR036412 -
Vra9g0972 293 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 19 252 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0972 Vra-Chr9 11870397 11873594 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0972 K07025 - gmx:106794111 481.87