Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0968 ATGGATTGGCTTAGAAGCAGCTTTTCTAGGAGTTCAAGGAATAGCAAAACCCCAAATACCCAAACACAGTCTAACTCCAAACTGCAGCATCAACAACAAGAAGAAAGCGTATATGGGATTACCGAGGAACTCATCAACCACGTCAAGTCCTTCACCGTCGACACATTTAAGAATTTCCCTCTCAAAGATGAAGATGAAGGCAGTTATTGGGTAGAAACTCAATCTTCTTCAAGCAAAGTTCGAAAGGATCTCTCCGATTGGCAAGAGAGACATGCAATCCTCGTTCTATCAAGAGTCAAGGAGATATCTCAATTGAGATATGCACTGTGTCCACGCCATTTGAAGGAAAATCAATTCTGGAAAATTTACTTTAAGCTTACCAGAAGCCATGTTCTCGAATATGAGCTTCGCCACATAAAACAGGAGAAACTGAAGCGGATGGCAATGGAAGATGAGAAATCTTCAGTTAACAACTCGTATGAAGTTGAAATGGCAGAGGCAAAGGATATCAACTTTGTTGAGCCTCTACCACCCGCTGAATGA 543 0.4162 MDWLRSSFSRSSRNSKTPNTQTQSNSKLQHQQQEESVYGITEELINHVKSFTVDTFKNFPLKDEDEGSYWVETQSSSSKVRKDLSDWQERHAILVLSRVKEISQLRYALCPRHLKENQFWKIYFKLTRSHVLEYELRHIKQEKLKRMAMEDEKSSVNNSYEVEMAEAKDINFVEPLPPAE* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0968 180 Gene3D BSD domain 43 144 IPR035925 -
Vra9g0968 180 ProSiteProfiles BSD domain profile. 86 131 IPR005607 -
Vra9g0968 180 SMART wurzfinal6 79 131 IPR005607 -
Vra9g0968 180 PANTHER OS04G0662000 PROTEIN 6 174 - -
Vra9g0968 180 Pfam BSD domain 83 135 IPR005607 -
Vra9g0968 180 SUPERFAMILY BSD domain-like 39 136 IPR035925 -
Vra9g0968 180 MobiDBLite consensus disorder prediction 1 34 - -
Vra9g0968 180 PANTHER BSD DOMAIN-CONTAINING PROTEIN 6 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0968 Vra-Chr9 11744469 11750233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0968 38 141 EF-hand Containing Proteins AT1G69030 51.923 3.38e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0968 - - gmx:100805729 283.493