Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0958 ATGCCCGGAGAACCACGCCCCTTGGAGATCCACCTCAGGGTCAATTCCAAGAGAAGCAACGCCAACATGGTGCACCCTGTGGCCGTGGAAACTGTGTACCCGGTTCAGCCCCAGAGACAGGAAGTCAAGCATTACCGCAAGTGGTTCCCTTGGTTGATACCTCTCTTTGTTGTTGCTAACATAATTTTGTTTGTGATCACTATGTATGTCAACAACTGCCCCCATAACTCTGTCTCCTGCATTGCCACCTTCTTGGGTCGCTTCTCCTTCCAGCCCTTCAAAGAAAACCCCCTCTTGGGCCCTTCATCCTTGACGTTACAGAAGATGGGGGCTCTTGATGTGAGCAGAGTGGTTCATAGACACCAGGGGTGGCGCCTTATCAGTTGTATGTGGCTGCATGGTGGGGTTTTCCATCTGTTGGCAAATATGTTGGGTATTCTAGTAATTGGAATTCGGCTTGAGCAAGAATTTGGGTTTGTGCTTATTGGACTGCTATTTGTCATATCTGGATTTGGGGGAAGTTTGCTTTCTGCTCTTTTCATCCAGTCAAACATTTCTGTGGGTGCTTCTGGTGCACTTTTCGGCTTGCTGGGGGGCATGCTTTCGGAACTCATTACTAACTGGACTATATATGAGAACAAGCTGGCAGCACTCCTCACCCTTGTGATCATCATTGTTATCAATCTAGCAGTGGGAATTCTCCCACATGTGGACAACTTTGCACATATTGGAGGCTTTCTTACAGGATTTCTTCTCGGATTTGTGTTTCTGATACGTCCCCAGTTTGGATGGGTTAACCAACGCTATGCTCCCCTAAATTATTCTCCAGAACGAGCTAAGCCTAAATTCAAAAAGTATCAGTGCATCTTATGGGTCCTCTCTCTCGTCATTCTAGTTGTTGGGCTTTCTGTTGGGCTTGTCGCGCTTCTCCGTGGTGTTGATGCCAATGACCACTGCTCCTGGTGCCATTATCTGTCTTGTGTTCCAACGTCAAAATGGAGCTGCCATACAGAGCCATCATATTGTGTGTCAAATCAGCTTGGTAACCAGCTGAATGTAACATGCTCAAGCAATGGTAAATCCAGTACATACTTCATGCAAGATCCAACCAGTTCCCAGATCCAGCAACTATGTACTCAACTTTGCAGTTGA 1152 0.4688 MPGEPRPLEIHLRVNSKRSNANMVHPVAVETVYPVQPQRQEVKHYRKWFPWLIPLFVVANIILFVITMYVNNCPHNSVSCIATFLGRFSFQPFKENPLLGPSSLTLQKMGALDVSRVVHRHQGWRLISCMWLHGGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFVISGFGGSLLSALFIQSNISVGASGALFGLLGGMLSELITNWTIYENKLAALLTLVIIIVINLAVGILPHVDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPERAKPKFKKYQCILWVLSLVILVVGLSVGLVALLRGVDANDHCSWCHYLSCVPTSKWSCHTEPSYCVSNQLGNQLNVTCSSNGKSSTYFMQDPTSSQIQQLCTQLCS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0958 383 PANTHER RHOMBOID-LIKE PROTEIN 4 17 382 - -
Vra9g0958 383 Pfam Rhomboid family 118 259 IPR022764 GO:0004252|GO:0016021
Vra9g0958 383 PANTHER RHOMBOID-RELATED 17 382 IPR002610 GO:0004252|GO:0006508|GO:0016021
Vra9g0958 383 Gene3D - 43 259 IPR035952 -
Vra9g0958 383 SUPERFAMILY Rhomboid-like 47 261 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0958 Vra-Chr9 11565049 11570805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0958 - - gmx:100801675 655.21