Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0954 ATGGAGAAGAACAAATCTGATGCAAATTGCGATGAAATTAACGATGAAATGAAATGGGTTCTTGATTCTTCTTTCGATCACAAAGGAAGAGTTCCTCTCAGAGCTTCAACTGGTTCATGGAGATCTTCTCTTTTCATTATCGCAATTGAATTTAGTGAGAGATTGAGCTACTTCGGAATAGCAACTAGTTTGGTTCTTTACCTTACAAAAGTTATTCATCAAGACCTTAAGACAGCAGTTAAGAATGTGAACTACTGGTCTGGTGTCACCACCTTGATGCCATTGTTAGGAGGATTCCTAGCTGATGCTTACTTGGGCCGTTACTGCACTGTCATAGCATCATGCATTGTTTATCTCATGGGTTTGGTTCTGCTTTCTCTGTCATGGTTCTTACCAGGCTTGAAGCCATGTGATCATGGTGCTACATGCATAGAACCTAGGAGGATTCACGAGGTGGCTTTCTTCCTAGGGATCTATCTGATATCCTTAGGTACAGGGGGGCATAAACCTTCCTTGGAAAGCTTTGGTGCTGATCAATTTGACGATAACAATGCTAAAGAAAGAAGGCAAAAGATGTCATTTTTCAACTGGTGGAACAGTGGATTGTGCAGTGGAATCATTCTGGGAGTGACTGTTATTGTGTATGCACAAGAACGTATCAATTGGGGGGCTGCTTATATCATCCTCACAGTCGTCATGGCTATCTCTTTGCTCATTTTCTTGATAGGAAGGCCTTATTATCGTTATAGGACACCTACTGGGAGCCCCTTGACTCCTATGTTGCAGGTTCTTGTTGCTGCTATTTCCAAAAGAAAGCTTCCATATCCTTCCAGTCCAACTCAATTGTATGAACTTTCCAAGGCTGAAAGCAGTGGTGAAAGATTTCTGGTTCACACCAAGAAACTCAAATTTCTTGACAAGGCAGCAATCACGGAAAATGAAGGGAACATAGAAGAGAAACAGAGTCCTTGGAGACTTGCAACAGTGACNAAGGTGGAAGAACTGAAGCTTATCATCAACATGATCCCCATTTGGGTGTTCACTTTACCATTTGGAATCTGTGCTGCACAAACCTCCACTTTCTTCATCAAGCAAGGTGCCATCATGAACANAAAATTAGGCAATGGGTTTGAGGTTCCTCCAGCTTCAATTTTCACTCTTGCTGCTATTGGGATGATATCTGCAGTGATTCTNTATGACAATGTCCTTGTGCCAACCCTAAGAAAGCTAACAGGAAATGAAAGAGGAATCAACATCCTCCAAAGGATTGGTATTGGAATGGTTTTCTCAGTTCTCTCAATGATAGTAGCAGCTATGGTAGAAAGAAAGAGGCTTGATGCTGTTGAGATGAATGGAGCAATAAAGGGTTCTTTATCAATGAGTGTCTTTTGGTTGGGCCCACAATTTATAATCATTGGAGTTGGTGATGGGTTTGCTCTTGTGGGCTTGCAAGAGTATTTCTATGACCAAGTGCCAGACTCAATGAGAAGTTTGGGAATAGCACTCTATCTTAGTGTGATTGGGGCTGCAAGTTTTCTAAGCAGTGTGTTGATAACGATTGTTGATCATGTGACAAGTAAGAGTGGAAAGAGTTGGTTTGGTAAGGATTTGAATTCNAGCCGCTTGGACAAATTCTTTTGGCTTCTGGCAGTGATCACCACATTGAACTTGTTCATGTTTGTGTTCTTTGCTCGCAAGTATAACTACAAGAATGTACAGAAGTTGGCCGTGGCTGATTGTTATGAAGACAAAAGTGATGATGGTAAAGCAGATGTTAGAGTCTGA 1785 0.4134 MEKNKSDANCDEINDEMKWVLDSSFDHKGRVPLRASTGSWRSSLFIIAIEFSERLSYFGIATSLVLYLTKVIHQDLKTAVKNVNYWSGVTTLMPLLGGFLADAYLGRYCTVIASCIVYLMGLVLLSLSWFLPGLKPCDHGATCIEPRRIHEVAFFLGIYLISLGTGGHKPSLESFGADQFDDNNAKERRQKMSFFNWWNSGLCSGIILGVTVIVYAQERINWGAAYIILTVVMAISLLIFLIGRPYYRYRTPTGSPLTPMLQVLVAAISKRKLPYPSSPTQLYELSKAESSGERFLVHTKKLKFLDKAAITENEGNIEEKQSPWRLATVTKVEELKLIINMIPIWVFTLPFGICAAQTSTFFIKQGAIMNXKLGNGFEVPPASIFTLAAIGMISAVILYDNVLVPTLRKLTGNERGINILQRIGIGMVFSVLSMIVAAMVERKRLDAVEMNGAIKGSLSMSVFWLGPQFIIIGVGDGFALVGLQEYFYDQVPDSMRSLGIALYLSVIGAASFLSSVLITIVDHVTSKSGKSWFGKDLNSSRLDKFFWLLAVITTLNLFMFVFFARKYNYKNVQKLAVADCYEDKSDDGKADVRV* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0954 594 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 584 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra9g0954 594 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT 22 584 - -
Vra9g0954 594 CDD MFS_NPF5 40 569 IPR044739 GO:0042937|GO:0042938|GO:0071916
Vra9g0954 594 Pfam POT family 109 528 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra9g0954 594 Gene3D MFS general substrate transporter like domains 11 576 IPR036259 -
Vra9g0954 594 SUPERFAMILY MFS general substrate transporter 35 570 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0954 Vra-Chr9 11491734 11499317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0954 1 587 Organic Solute Cotransporters AT3G53960 64.081 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0954 - - gmx:100806045 1048.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0954 9 11491734 11499317 Vra9g0954 9 11491734 11499317 ECH