Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0886 ATGACTGGGGTTTCTGAAAAAGCAGGTGTTTCTCTTGATCAGCTTAAGGAGATTATGAGTGAATTTGCAAAGGAGAGGGATTGGGAGCAGTTTCATAGCCCAAGGAACCTCCTTTTGGCTTTGGTGGGTGAAATGGGAGAATTGTGTGAGATATTTCAGTGGAAAGGAGAGGTTCCAAAGGGTCTTCCAGATTGGAAAGAAGAAGAAAAAGTTCATCTTGGAGAAGAACTTTCAGATGTGTTGCTTTATCTTGTGAGGCTCTCTGACATGTGTGGTGTTGATCTTGGCAAAGCTGCTTTGAGAAAGGTTGAACTGAATGCCATGAAATACCCTAAAAAAGTTTCTGAAAAAGAGCCTTCAATCAGCACCAAAGAAGATGAAAATTTAGAAGGTGTTTGA 399 0.4085 MTGVSEKAGVSLDQLKEIMSEFAKERDWEQFHSPRNLLLALVGEMGELCEIFQWKGEVPKGLPDWKEEEKVHLGEELSDVLLYLVRLSDMCGVDLGKAALRKVELNAMKYPKKVSEKEPSISTKEDENLEGV* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0886 132 PIRSF UCP029826_pph 4 128 IPR025984 GO:0009143|GO:0047429
Vra9g0886 132 CDD NTP-PPase_RS21-C6_like 16 106 IPR025984 GO:0009143|GO:0047429
Vra9g0886 132 MobiDBLite consensus disorder prediction 112 132 - -
Vra9g0886 132 Gene3D - 4 117 - -
Vra9g0886 132 Pfam MazG-like family 44 116 IPR025984 GO:0009143|GO:0047429
Vra9g0886 132 SUPERFAMILY all-alpha NTP pyrophosphatases 11 114 - -
Vra9g0886 132 PANTHER - 1 119 - -
Vra9g0886 132 PANTHER OS04G0346800 PROTEIN 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0886 Vra-Chr9 10494701 10496980 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0886 K16904 - gmx:106798062 213.001