Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0874 ATGGAAGAATATTACTACAAGAGGCATCATGTGCCAGCATTTGGGAGCTGGGATTGGAATGATAATCTCCCCTTCACTCAGTGCTTTGAGTCTGCAAGACAAGCTGGTTTGTTAAGATACAGTTATTCTGAGTCTGAAGATAGAGATCTTTATGTCACTGGTGACTTGTATGAGAATGATGTTGTCACACCTGCTATGATTGTTGTTCCTCGTAGAAGGGAAAAGGTACGTTGCCAGCATGAAAAAGAAGCAAAAAAGCAGAATTGGGTGAGTAATGTGAAGGAGCTATCTAGCCCAACTAATCCAATTTCAAGACCAAAACCAAAGCCTGTTGATGAAGACTTGTACAAGATATCACCAGAGCTACTTTATGCCAAAACTAGGAAGAAGAGAGGGTTGTGCTTCTTTCCAAGCTGTTTGATACCAACATGCATTGCCTGA 441 0.4127 MEEYYYKRHHVPAFGSWDWNDNLPFTQCFESARQAGLLRYSYSESEDRDLYVTGDLYENDVVTPAMIVVPRRREKVRCQHEKEAKKQNWVSNVKELSSPTNPISRPKPKPVDEDLYKISPELLYAKTRKKRGLCFFPSCLIPTCIA* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0874 146 PANTHER EXPRESSED PROTEIN 1 145 - -
Vra9g0874 146 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN-RELATED 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0874 Vra-Chr9 10319819 10323056 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0874 - - gmx:100306260 295.819