Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0868 ATGGTCAAGTGTTGTAGTAGCATGTGCTTGTGTTTGGTCTTACTTAGTGTTTTCCTGTGCTTTGTGTCAACACAATCAGCACCAGAAAGTGCCATTGTGACTCAGGTTCCTGGCTTCAGTGGGACTCTACCTTCCAAGCACTATGCTGGGTATGTGACAGTGGGTGAGAGTGGTGGGAAGAACTTGTTTTACTATTTTGTTGAATCACAGGGTAACCCTTCTGTGGACCCTGTGGTTCTGTGGCTTAATGGGGGACCTGGCTGCTCTAGCTTTGATGGATTCGTGTATGAGCATGGACCTTTTAATTTTGAGGCAGCAAAGACAAAAGGGGGTCTTCCCATACTACATCTCAATCCATACAGCTGGTCAAAGGTTTCCAGTGTTATATATTTGGATTCTCCTGCTGGTGTGGGGTGGTCATACTCAAAGAATGGAACTGATTACATAACTGGAGACACAAAGACTGCCTCTGATTCACATGAGTTTCTTCTTAAGTGGTTTGAACTATACCCTGAGTTCCTTTCCAACCCATTCTTCATTGCTGGAGAGTCCTATGCAGGAGTGTATGTGCCTACTCTTGCTTCTGAAGTTGTGAAAGGAATTGAGGCTGGTGTGGAGCCCAAACTAAATTTCAAGGGTTACATGGTTGGAAATGGTGTGACAGATGAAGAAATTGATGGCAATGCTCTTATTCCATTTGTACATGGGATGGGACTTATCTCAGAAGACCTGTTTAAGGAGGTGAACAGTGAGTGCAATGGGAACTTTTATAATCCAACCAGTGAAAGTTGCTATAGCAAGCTTGCAAAAGTTGATAAGTTGGTTGATGGGTTAAACATTTACAACATCCTAGAACCATGCTATCACGCCACAGAGGCAGTGAATATTACAGAATCCTATATTAGGTTGCCATCTAGCTTTCGGAAGTTGGGTGAGACTGAAAAACCTTTCCCAGTGAGGAAAAGAATGTTCGGTCGTGCTTGGCCCCTAAGAGCACCTGTGAGAGATGGAATTGTACCAACTTGGCCACAGCTGACGAGTTTGCAACTAACTCCACCATGCACGGATGATGAGCTTGCAAACGAATGGTTGAACAATGAAGAAGTCAGGAAAGCTATTCATGTTGCACAGAAAAGTGTCATCAGTAGTTGGGAAATATGCACAGAAGGAATTGTATATTATCATGATGCTGGGAGCATGATCAGCTACCACAAGAACTTAACTTCCAAAGGTTATAGAGCACTTATATACAGTGGTGATCATGACTTGTGTGTTCCATATACGGGGAGTGAGGCATGGACAAGATCTATTGGATACAAGATTGTTGATGAATGGAGACCATGGTCTTCCAATGGTCAAGTTGCAGGGTACACACAAGGATATGACAAAAATCTTACTTTTCTGACCATAAAGGGATCTGGGCATACTGTTCCGGAATATAAACCACGAGAGGCATTGGACTTTTACAAACGCTTTCTCGCTGGATTGCCAATATGA 1497 0.4322 MVKCCSSMCLCLVLLSVFLCFVSTQSAPESAIVTQVPGFSGTLPSKHYAGYVTVGESGGKNLFYYFVESQGNPSVDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKTKGGLPILHLNPYSWSKVSSVIYLDSPAGVGWSYSKNGTDYITGDTKTASDSHEFLLKWFELYPEFLSNPFFIAGESYAGVYVPTLASEVVKGIEAGVEPKLNFKGYMVGNGVTDEEIDGNALIPFVHGMGLISEDLFKEVNSECNGNFYNPTSESCYSKLAKVDKLVDGLNIYNILEPCYHATEAVNITESYIRLPSSFRKLGETEKPFPVRKRMFGRAWPLRAPVRDGIVPTWPQLTSLQLTPPCTDDELANEWLNNEEVRKAIHVAQKSVISSWEICTEGIVYYHDAGSMISYHKNLTSKGYRALIYSGDHDLCVPYTGSEAWTRSIGYKIVDEWRPWSSNGQVAGYTQGYDKNLTFLTIKGSGHTVPEYKPREALDFYKRFLAGLPI* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0868 498 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 18 495 - -
Vra9g0868 498 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Vra9g0868 498 Gene3D alpha/beta hydrolase 25 319 IPR029058 -
Vra9g0868 498 SUPERFAMILY alpha/beta-Hydrolases 33 497 IPR029058 -
Vra9g0868 498 Pfam Serine carboxypeptidase 37 494 IPR001563 GO:0004185|GO:0006508
Vra9g0868 498 ProSitePatterns Serine carboxypeptidases, histidine active site. 465 482 IPR033124 GO:0004185
Vra9g0868 498 Gene3D - 351 497 - -
Vra9g0868 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Vra9g0868 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Vra9g0868 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Vra9g0868 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 465 478 IPR001563 GO:0004185|GO:0006508
Vra9g0868 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 495 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0868 Vra-Chr9 10236801 10241956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0868 359 498 Calmodulin-binding Proteins AT2G22960 47.857 2.86e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0868 K16296 - gmx:100792057 890.567