Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0857 ATGAGTGAAATGCAGGCACTAGATAATGGAGAGTTGAACAGAATGGAAGAAACGAAACTGTTTTGTGAGGAAATGAAAGAAGCTCAAAAAGCAGCGATGGAAAAACGGTGGCAAGATTTCAAGAAAAAGATGATGGAAAACCAGGGAAACATCCTCACGCAGTTTGACTTGTTAGGAAACAACGCGATTCATGTGGCAACTTGCTCCTACCCTGAACTTCTGAAAGAGATGATAGAAATGGTGCCTGAAGGAGAAAGATGGCATGCTTTGTGCAAGCAGAATGGTGAGGGAAACAGCGTCTTGCATGAGATCGTGTTTTCCAAAAAGGCAAAGGAAATGGCTGAGGTTGTATTCAGATTTGAACATCAGTTGCTGCCACAAGAAATGGAGGAGCAGAGGTCATTGCTAGAGCTTAGAAACAACAGAGGAGAAACTCCTTTGTTCGTTGCTGCCATGCATGGAAAGCTCAAGATTCTTAAGTATATGGCTAAGCGTGTAGGCGCCATGGACAATCTTCGGAAACATTTTCGTCGATCTGACAAATATAACGCCCTTCATGCCAGTGTTATTGGCCAACATTTTCTGCTTCCTGATGAATATGATAATAATGATGAGTTTAACCAAAAAAAGGATGAAGAAAATAGTAAAGAGGATCAGTCTAAAGTCTGCAAATCTGCCATTTCAAAGATAAACTATGGCTTTTGGAAATGCTTGGCGGCAGAGTTTGAAGGAATTGACCACATGTGGAAGGCAAAAAAAAAACATAAGTTGGCTGAACAACTAGCCAGCACTTTAGTAATATATGACTTATCATGGCAAGTATCAAACAATGAGTATAATAGGACATTATTGATTACAATGCCACATGATCCTTTAAATGTGACAAAAAGGAGAAGAGTAAGTATACAGAAAAGGGAAGAAAGGCGCAAGAACATTGAAGAAAGACCAGAACGCACAGCATTGTTTATAGCAGCTAAAACTGGAATTGTAGAAATTGTTAAAAAGTTTCTTGAAGTGTATCCTGCATCTATATATCATGTCACCGAGAATAAGCAGAACATATTAACAATGGCGGTTAAATATCGACAGAAAAAAATCCTTAAAATAATAAAAAGAACAGGTACCATGGAATCATTGGTTGGTCAAATCACAGATAAAGGAAGAACCGTCTTGCATGAAGTTGCAAGAATGGATTATTACAAAGCAGAGCACTTAGCTGGAGTGGCATTCCATCTACAAGATGAATTGCGTTGGTATGATACTGTGAGAAGATTCACACCTAAACATTACAACATGCACTCTGACATAGATGGACACACACCAGAAGACATGTTAGAAATTGAGCATGATGCAATGCTTAAAGAGGCACAAAAATGGTTGAAGGAAACAGCTCAATCATGTTCCACGGTTGCTATTCTGGTAGCCACAGTTGTATTTGCTGCTGCATACACCATTCCAGGTGGAACTGAAAATGGCACTCCGGTGTTTCTTCATTCAAGTGAGTTTCTCTTTTTCACCATCATGGATGTTGTGGCTCTTGCTACCTCACTTGCTTCAGTCGTGGTCTTCCTTTCCATTCTCACTTCTCCATGTGAATTATGGGATTTTCATAAGTCTCTCCCAAGAAAACTCAATCTGGGATTTGCTTTGTTGTTCTTATCATTGATGACAACAATGCTTGCATTCAGTGCAACCATGTTGCTGACCATTCGATTGGAATGGAAGAATTGGACTTCCACATTGATATATAGTGCTGCTTTCTTTCCTGTCACCATTTTTGCAATCATTCAGTTTCCTGTTTATGTGATGGTTCGAAGCATCACCAAGCATCTTTGGAAGCAAGTTAAGAAGGTTTTTCCAACAAGATTGATTGAACACTGCATGAGTAACTGTTGA 1896 0.394 MSEMQALDNGELNRMEETKLFCEEMKEAQKAAMEKRWQDFKKKMMENQGNILTQFDLLGNNAIHVATCSYPELLKEMIEMVPEGERWHALCKQNGEGNSVLHEIVFSKKAKEMAEVVFRFEHQLLPQEMEEQRSLLELRNNRGETPLFVAAMHGKLKILKYMAKRVGAMDNLRKHFRRSDKYNALHASVIGQHFLLPDEYDNNDEFNQKKDEENSKEDQSKVCKSAISKINYGFWKCLAAEFEGIDHMWKAKKKHKLAEQLASTLVIYDLSWQVSNNEYNRTLLITMPHDPLNVTKRRRVSIQKREERRKNIEERPERTALFIAAKTGIVEIVKKFLEVYPASIYHVTENKQNILTMAVKYRQKKILKIIKRTGTMESLVGQITDKGRTVLHEVARMDYYKAEHLAGVAFHLQDELRWYDTVRRFTPKHYNMHSDIDGHTPEDMLEIEHDAMLKEAQKWLKETAQSCSTVAILVATVVFAAAYTIPGGTENGTPVFLHSSEFLFFTIMDVVALATSLASVVVFLSILTSPCELWDFHKSLPRKLNLGFALLFLSLMTTMLAFSATMLLTIRLEWKNWTSTLIYSAAFFPVTIFAIIQFPVYVMVRSITKHLWKQVKKVFPTRLIEHCMSNC* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0857 631 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 59 614 - -
Vra9g0857 631 SMART ANK_2a 350 378 IPR002110 GO:0005515
Vra9g0857 631 SMART ANK_2a 142 171 IPR002110 GO:0005515
Vra9g0857 631 SMART ANK_2a 316 346 IPR002110 GO:0005515
Vra9g0857 631 Pfam Domain of unknown function 457 567 IPR026961 -
Vra9g0857 631 PANTHER CASKIN 59 614 - -
Vra9g0857 631 Gene3D - 2 196 IPR036770 -
Vra9g0857 631 Gene3D - 277 467 IPR036770 -
Vra9g0857 631 SUPERFAMILY Ankyrin repeat 32 188 IPR036770 -
Vra9g0857 631 SUPERFAMILY Ankyrin repeat 132 401 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0857 Vra-Chr9 10077557 10083705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0857 318 570 Miscellaneous Gene Families AT3G09550 24.579 1.98e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0857 - - gmx:100788731 853.203