Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0854 ATGTCTTACCCCATCAAAACGATCGTCGTTTTGGTTCAAGAAAACCGTTCGTTTGACCACATGTTGGGTTGGATGAAGTCCCTCAACCCGGAAATCGACGGAGTCACCGGTTCGGAGTCAAACCCAATTTCCACCTCGGAGCCAGGCTCGAACCGGGTTTATTTTTCCGACCAGTCTGACTTTGTTGAACCGGACCCGGGTCACACGGTGGAGGATGTGTACGAACAAGTTTTCGGCGAACCGTGGAGCGAGTCCTCGACGACGAAGAAAGTGTTGCCGACAATGGACGGGTTCGCTCAAAACTCGGTGAAGCAAAAGAAGGGGTCAACGGCGGAGACAGTGATGAACGGGTACAAACCGGATCTGTTACCAGTTTATCGAGAGTTAGTTAAGGAGTTTGCGGTGTGTGATCGGTGGTTTGCTTCGGTTCCCGGTCCGACCCAACCGAACCGGCTATACGTGCACTCTGCGACGTCGTATGGGTTGACCACTCAGGATACGCAGAAACTTATTGGAGGTTTGCCACAGAAGACTATATTTGACTCTTTGGACGAAAATGGGTTCAGTTTTGGAATATATTACCAATACCCACCATCCACACTTTTTTATAGAAACCTTAGGAAAGTGAAATACATAGACAACTTTCATTTGTTCGATCAAAAGTTCAAGAAGCACTGTGAAGAAGGGAAATTGCCAAACTATGTGGTGATTGAGCAAAGATATTTTGACTTGCTATCAGTGCCTGCAAATGACGACCATCCATCGCATGATGTTGCAGAGGGACAAAGGTTTGTGAAAGAAGTGTACGAGACACTAAGAAGAAGTCCTCAATGGAATGAAATATTGTTTGTGATAACATATGATGAACATGGCGGGTTCTATGATCATGTGCCAACGCCTGTCGATGGAGTTCCAAACCCAGATGACATTGCAGGTCCTCCACCATTCAACTTTCACTTTGATAGACTTGGTGTTAGGGTTCCTACCATCATTGTTTCTCCATGGATTCAGGCAGGGAAAGTGTTGCATGAACCCTCTGGGCCATTCCCAACATCACAGTATGAACATTCATCAATACCAGCAACTGTGAAGAAAATGTTCAATCTTCCTCATTTCTTGACAAAGCGTGATGCATGGGCTGGAACATTCGAAAATCTCTTATCTCTTACCACTCCACGTACTGATTGTCCAGTGAAATTGCCGGAGCCTATGAAACTACGAGAGGGTGGTGCAGAAGAAGATGCAGGATTGAGTGAGTTTCAAGAAGAATTGATATACTTGACAGCAACTTTAAATGGGGATCATAAGAAGAGTACGTACCCCAAATTAACACAGAATTTAACTGTTTCAGAGGCAGTTAAATACTGTGAAAGTGCATTTCAAACGTTCTTGAATGAGTGTGAGAAAGCAAAGGAAAGTAGAATTGATGGATCTGAAATTGTTCATTGTGCAAAGCCACACACAGCACCACAATCCAAAACTTTCTTGCACAAGATGTTGTCTTGTATATTGTGTAAAGATTGA 1524 0.4423 MSYPIKTIVVLVQENRSFDHMLGWMKSLNPEIDGVTGSESNPISTSEPGSNRVYFSDQSDFVEPDPGHTVEDVYEQVFGEPWSESSTTKKVLPTMDGFAQNSVKQKKGSTAETVMNGYKPDLLPVYRELVKEFAVCDRWFASVPGPTQPNRLYVHSATSYGLTTQDTQKLIGGLPQKTIFDSLDENGFSFGIYYQYPPSTLFYRNLRKVKYIDNFHLFDQKFKKHCEEGKLPNYVVIEQRYFDLLSVPANDDHPSHDVAEGQRFVKEVYETLRRSPQWNEILFVITYDEHGGFYDHVPTPVDGVPNPDDIAGPPPFNFHFDRLGVRVPTIIVSPWIQAGKVLHEPSGPFPTSQYEHSSIPATVKKMFNLPHFLTKRDAWAGTFENLLSLTTPRTDCPVKLPEPMKLREGGAEEDAGLSEFQEELIYLTATLNGDHKKSTYPKLTQNLTVSEAVKYCESAFQTFLNECEKAKESRIDGSEIVHCAKPHTAPQSKTFLHKMLSCILCKD* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0854 507 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 2 491 IPR007312 GO:0016788
Vra9g0854 507 SUPERFAMILY Alkaline phosphatase-like 172 371 IPR017850 -
Vra9g0854 507 Pfam Phosphoesterase family 5 370 IPR007312 GO:0016788
Vra9g0854 507 Gene3D Alkaline Phosphatase, subunit A 1 180 IPR017850 -
Vra9g0854 507 Gene3D Alkaline Phosphatase, subunit A 217 413 IPR017850 -
Vra9g0854 507 PANTHER NON-SPECIFIC PHOSPHOLIPASE C3 2 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0854 Vra-Chr9 10052767 10055070 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0854 2 507 Acyl Lipid Metabolism Gene Families AT3G03530 61.626 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0854 K01114 - gmx:100789421 912.524