Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0853 ATGGCTTCCTTCTCCGAAAGCGATCATCAACAGATTCTGGTGGAGCGTAAATCCCATGCGAGAGTTCTGACCCTAAACAGGCCTAAGCAGTTGAATGCCCTCTCTTTTTATATGGTTTCACGTCTGCTTGAAGTTTTTACTGAGGATGAGGAAAATTCTGATATTAAATTGGTTGTCGTGAAGGGAAATGGAAGGTCTTTTTGTGCTGGTGGTGATGTGGCAGCCGTTGCTCGAGAAGGAAGTAAAGGTGACTGGAAGAGTGGTGCAAAATTTTTTCGTACTGAATATACAATGAATTACGTTATGGCAACATATAGTAAGCCCCAGGTTTCCATTCTTAATGGAATTGTCATGGGAGGTGGTGCTGGTGCTTCTGTACATGGAAGATTTCGTGTTGTTACAGAGAATACGGTCTTTGCAATGCCAGAAACAGCTTTGGGTTTATTTCCTGATGTAGGTGTGCCATATTTCTTGTCAAGACTGCCTGGCTTTTTTGGAGAATATGTTGGTCTTACAGGTGCTAGGTTGAATGGTGCAGAAATGCTTGCTTGTGGTCTTGCAACACATTTTGTTCCTTCATCGAAATTGTCTTTATTGGAAGAAGCATTATGCAAGGTAGAAACTAGTGATCCAAATGCAGTGTCTGCTATTATCGATAAGTACTCAGAGCAACCTTTCCTAAAAGACGACAGTGTTTATCACAGGATGGATGTGATCAACAAGTGCTTCTCAAGAAAATCAGTCGAGGGAATAATATCTTCTCTCGTAAGTTGTGAGATAGAAGCTACAAGTAAGGCTGATCATTGGATTTCTGAAACTGTTCAAACCTTAAAGAAAGCATCTCCAACAAGCCTTAAAATCTTTCTTAGATTGATTAGAGAAGTTCGGCTCCTAGGTATTGGTCCAAGCCTTGTTCTTGAATATAGAATTGTTTGTCATATTCTAAAAGGACACTACAGCAAGGATTTCTTTGAGGGTTGTAGGGCTATACTTTTAGATAAGGACAGGAACCCCAAGTGGGAACCTTCCAAATTGGAGCTTCTCAGCGATAGTGATGTCGACCGTTACTTCTCCAAACTCGATGATGAAGAATGGGAAGAATTGGAACTTCCTAAAAGGTTAAAAAATCTGCCTACATATGCTATTGCAAAGCTGTAA 1158 0.4059 MASFSESDHQQILVERKSHARVLTLNRPKQLNALSFYMVSRLLEVFTEDEENSDIKLVVVKGNGRSFCAGGDVAAVAREGSKGDWKSGAKFFRTEYTMNYVMATYSKPQVSILNGIVMGGGAGASVHGRFRVVTENTVFAMPETALGLFPDVGVPYFLSRLPGFFGEYVGLTGARLNGAEMLACGLATHFVPSSKLSLLEEALCKVETSDPNAVSAIIDKYSEQPFLKDDSVYHRMDVINKCFSRKSVEGIISSLVSCEIEATSKADHWISETVQTLKKASPTSLKIFLRLIREVRLLGIGPSLVLEYRIVCHILKGHYSKDFFEGCRAILLDKDRNPKWEPSKLELLSDSDVDRYFSKLDDEEWEELELPKRLKNLPTYAIAKL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0853 385 Gene3D - 6 372 - -
Vra9g0853 385 CDD crotonase-like 12 203 - -
Vra9g0853 385 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE 1 7 385 - -
Vra9g0853 385 Pfam Enoyl-CoA hydratase/isomerase 21 357 IPR045004 -
Vra9g0853 385 SUPERFAMILY ClpP/crotonase 8 343 IPR029045 -
Vra9g0853 385 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 7 385 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0853 Vra-Chr9 10036188 10047539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0853 7 385 Miscellaneous Gene Families AT5G65940 65.699 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0853 K05605 - gmx:100170729 634.024