Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0844 ATGACCACGATCAGCACATCATCTTTTTCTTTTATGGTTATTATGAGGACTATCTCTAAAGTAGCTATGATTTTATTATCAATGATGATGTTGCTTTCCTGCACAATCCACTCTGCTGTTTTAGAGTCTGATGAAAATCATATAAAGTCAGCTACTTTTTTGTCTGAAACATTTGAAGTGGGACCAGGAAAAATTGTGGTGAAAACATTATCAGATATTGACTTTCCAAGGGGTCACATTGGGGTCAAGAGTTTTGATGTTGAAGTAGTTGATGAAGATGGTAATTCAGTACCTTTGTATGAAACTTACCTTCACCATTGGTTTGCTGTAAAATATATTGAAAACATTACCATGGCAGACTACATTAAACAATCTCACGACCTTAGCAATGGTATTGAATTTGAAAGAAACGATGGTACATGCCAAGGTTTTTTGCTTCCACATTATTGGGGCTTGGGAGGAGAATCACGAGGAACATATTCAAATCTTCCAGATCCTTTTGCAGTTGAATTAGGTAATCCTGCAAAAATAAAGAATGGGTTTAAAGAAAAATGGTTGTTTAGCATCATGGTTATTGACACACGTGGAACACATGATAAAAAAGGTTGTACAGAGTGTAGGTGTAAGCTTATGAATCTCCCTAAGGACTTTTACAATGTCACAATGGGCATTGATGGTCAATTGTTGTCTAAAAATTATAAAGGAGGACTCTTTTGTTGTCAAGATAACGGACAATGCAAACTAAGAAATGGTTATCGTGGCCCAACAAGAAAGCTTTCCCTAAGATACAAAATAAGGTGGGTTGATTGGGATGAACACCAAGTGCCTCTTAAGTTCTACATACTTGATTCAACTGATCGTGTAAGATCAAATGGTTCTACACCAATTCATGATTGTCAGGCAGAGTATAAGATCTCGAGAAATCATGACAATGACTTTCCTCATGTTAAAAAAGCAAACATCCCAATGACAAAAGGTGGTTATCTTATATATGGCACTGCTCATATGCACACTGGTGTTGTCAATACTACTCTATATGGACAGGATGGAAGGGTTTTATGCACTTCAAATCCAAAATACGGAACTGGAAAAGAAGCAGGAAATGAAAAGGGTTACCTAGTTGGAATGTCAGTTTGTTATCCTAAACCCGGTTCCATCAAGATTGAAGATGGAGAAATTCTAACATTGGAATCCATATATGAAAACAAATTTCGTACTGGAGCTATGGGACATTTCTACATTTACTTGGCAGACCAAATACCAAACAAATAA 1272 0.364 MTTISTSSFSFMVIMRTISKVAMILLSMMMLLSCTIHSAVLESDENHIKSATFLSETFEVGPGKIVVKTLSDIDFPRGHIGVKSFDVEVVDEDGNSVPLYETYLHHWFAVKYIENITMADYIKQSHDLSNGIEFERNDGTCQGFLLPHYWGLGGESRGTYSNLPDPFAVELGNPAKIKNGFKEKWLFSIMVIDTRGTHDKKGCTECRCKLMNLPKDFYNVTMGIDGQLLSKNYKGGLFCCQDNGQCKLRNGYRGPTRKLSLRYKIRWVDWDEHQVPLKFYILDSTDRVRSNGSTPIHDCQAEYKISRNHDNDFPHVKKANIPMTKGGYLIYGTAHMHTGVVNTTLYGQDGRVLCTSNPKYGTGKEAGNEKGYLVGMSVCYPKPGSIKIEDGEILTLESIYENKFRTGAMGHFYIYLADQIPNK* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0844 423 Pfam Stress up-regulated Nod 19 46 419 IPR011692 -
Vra9g0844 423 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 18 422 IPR011692 -
Vra9g0844 423 PANTHER STRESS UP-REGULATED NOD 19-RELATED 18 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0844 Vra-Chr9 9893588 9895365 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0844 - - pvu:PHAVU_011G142100g 676.781