Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0840 ATGGAAGACACGGATTCAGTTGCTACGCTGATAGATTCTACAACTTCCAAGATACAACAGCTGCAAAAGGCGTTTGCTGAACTTGAAAGTTACCGTGCTGTTACTCTGAACCTGAAATGGAAAGACCTAGAGGAACATTTTCATGGTCTTGAGAAATCCTTGAAGAGGCGATTTGATGAATTGGAAGACCAGGAAAAAGAGTTTGAGAACAAAACGAGGAAGGCTCGGGAAATACTGGAACAGCGGCAAGCAGCTGTTTATGCCAAGGAGCAAGCCACGTTGCAGGGGCTTCAGGAGAAACGGGATGCTGCTGTATTTGATATTATGAATGCTCGAGAAAAGCACAGGAAGGTTTCGTCAAGTGAATTGGCTATTGTCTCAAATAGGGGTAATGGGGCATTGTGTGTGGAGGAGAAACCAGTAGATGTCGTGTCCTTTGCGGCTAAAGGTAAAGTGGGAGAGGTGGAACTTTCTCCTGAAATTGAAAATGTGGAGTTGTCTTATCCAGACTTGGTAAAACTATGTAAAGAGATGGATGCTGCGGGACTTCACAAATTCATATCTGATAATCGTAAGAACCTTGCTGCTGTAAGGGAGGAAATACCACATGCATTAAGAGCTGCTCCTAACGCTGCCTGTTTAGTTTTAGATTCTCTGGAAGGATTTTACTGTTCAGAAGTGTCAAATCAGGATATAAAGAAGGATGCTAACTTACTGGGTCTTCGACGAACATGTATCATGCTGATGGAATGTCTGTGTGATTTCCTGAGAAACTCAGATTGTGTTTCTAATGTAATTTCGGAAGATATCAAAGACAGGGCAAAGACAATTGCTGAGGAATGGAAACCCAGATTGGATACTCTTGACATGGATGCTAGCAATGGGAATTCCTTGGAAGCTCATGCATTTTTGCAACTTCTAGCAAGTTTTGGTATTGCATCTGGTTTTAATGAGGAGGAGTTATCCAGGCTAATTCCAATGGTATCTCGACGTCGCCAAACTGCTGATTTGTGCCGTTACCTTGGGTTGTCAGAGAAGATGCCTGGTGTCATTGAAGTTTTGGTGAATAGTGGGCGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACAGAACAATTTTCACCCATTCCTTTACTGAAGTCTTACTTGAAGGATGCTAGGAAAACTTCGTCTCCCATCAAAGGTGTTAACTCATCTCCTACAGCACAGATTGATGTTAACGAGCGAGAGCTGATTGCACTTAAGGCTGTAATTAAGTGCATTGAAGATCATAAACTGGATGAGCAGTATCCTCTGGAACCTCTCCAGAAACGAGTGATCCAACTGGAGAAGGCGAAGGCTGACAAGAAAAGGGTAACTGAAGCAACAAAGCCTCAACCGAAGAGACCCCGTGCTAACAGTGCTGGATATGGTCCACGTGTCACTAACTTTCCATCTGACAAAACTTCATATGCTAGAGTTGCTGACAGGTATCCTCCTCAATATGTGTATGACCGATCTTACATGTACCCTGGACCAACTGACAATCACTGCCCCCCTCTCATGGCTTCTGCAACTTATAACATCTCTCCTAATCCTGCCAACTACTTTGGGAATGGTTACCAGTACCAAGCCACATATCTCCACTAG 1638 0.4341 MEDTDSVATLIDSTTSKIQQLQKAFAELESYRAVTLNLKWKDLEEHFHGLEKSLKRRFDELEDQEKEFENKTRKAREILEQRQAAVYAKEQATLQGLQEKRDAAVFDIMNAREKHRKVSSSELAIVSNRGNGALCVEEKPVDVVSFAAKGKVGEVELSPEIENVELSYPDLVKLCKEMDAAGLHKFISDNRKNLAAVREEIPHALRAAPNAACLVLDSLEGFYCSEVSNQDIKKDANLLGLRRTCIMLMECLCDFLRNSDCVSNVISEDIKDRAKTIAEEWKPRLDTLDMDASNGNSLEAHAFLQLLASFGIASGFNEEELSRLIPMVSRRRQTADLCRYLGLSEKMPGVIEVLVNSGRQIDAVNLAFAFDLTEQFSPIPLLKSYLKDARKTSSPIKGVNSSPTAQIDVNERELIALKAVIKCIEDHKLDEQYPLEPLQKRVIQLEKAKADKKRVTEATKPQPKRPRANSAGYGPRVTNFPSDKTSYARVADRYPPQYVYDRSYMYPGPTDNHCPPLMASATYNISPNPANYFGNGYQYQATYLH* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0840 545 Coils Coil 51 81 - -
Vra9g0840 545 Pfam Frigida-like protein 168 456 IPR012474 -
Vra9g0840 545 MobiDBLite consensus disorder prediction 451 484 - -
Vra9g0840 545 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 3 545 - -
Vra9g0840 545 PANTHER FRIGIDA-LIKE PROTEIN 3 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0840 Vra-Chr9 9842236 9847090 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0840 - - gmx:100806993 972.615