Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0839 ATGGAAGACTCGGATTCCGTTGCTACACTGATGGATTCTACAACTTCTAAGATACAACAGCTGCAGAAGGCATTTGCTGAACTTGAAAATTATCGGGCTGTTACACTTAATATGAAATGGAAAGAATTAGAGGAACATTTTCATGGTCTTGAGAAATCCTTGAAGAGGCGCTTTCATGAATTGGAAGACCAAGAGAAAGAGTTTGAAAACAAGACAATGAAAGCTCGCCAGCTGTTGGAGAAGCGGGAAGCTGCCGTTTTTGCCAAGGAGCAAGCTTCGTTCCAGAGGATTCAAGAGAAAAGAGATGCTGCTGTATTTGCCATTGTAAATGCTCGAGAAAAGCACAGGAAGATTTCATCACGCGAATTGGCTACTGTCTCAAATGGTGGTAAAGTAGGGATAGTTGTTGTAGAGGAGAAACCTGTGGATAACGTGTCCACTGCAGCTGAATGTAATGTGGAAGATGTAAAACTTCCTGAAAATGGAAATGTGGAGTTGGTATCTTATCCAGAGTTGGTGAAATTATGCAAGGAGATGGATGCTGCTGGAATTCACAAATTCATATCTGATAACCGTAAGAATCTGGCTGCTGTAAGGGATGAAATACCAAATGCTTTAAGAGCTGCTCCTAATGCTGCCCGTTTAGTTTTAGATTCTCTGGAAGGATTTTACTGTACGGAAGTGTCAAATCAGGATGTAAAGAAAGATGCTAACTTATTGGGTCTTCGCAGAACTTGTATCATGCTGATGGAATGTCTCTGTGATTTCCTGAGCAACTCAGATTGTGTTTCTAATGTAATTTCAGAAGATATCAAGGACAGGGCAAAGGCAGTTGCTGAAGAGTGGAAACCCAGATTGGATGCTCTTGACATGGATGCTAGCAATGGGAATTCTCTGGAGGCTCATGCGTTTTTACAACTTGTAGCTAGTTTTGGTATTGCCTCTGGTTTTGATGAGGAGGAATTATCCAGATTGATTCCAATGGTATCTCGACGCCGTCAAACTGCTGATTTATGTCGTTTCCTTGGGTTGTCAGAAAAGATGTCTGGTGTAATTGAGGTTTTGGTGAACAGTGGGCGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACTGAACAGTTTTCTCCCGTTACTTTACTGAAGTCTTACTTGAAAGATGCAAGAAAAGCTTCTTCTCCTGTCAAAAGTGTTAACTCATCTCCCACTGCACAGATTGAGGTTAATGAACGGGAGCTGGTTGCTCTTAAGGCTGTAATAAAGTGCATTGAAGAACATAAACTTGACGAGCAGTATCCTCTGGATCCTCTGCAGAAGCGATTAATACAGTTAGAGAAGGCGAAAGCTGACAAGAAGAGAGAAACTGAAGCAACGAAACCTCAACCCAAGAGACCTCGCGCAAATGGTGCTGGATACGGTCCACGCGTCACTAACATCCCCTGTGATAAAACTTCGTATGCTAGAGTTGCTGACAGGTATCCACAGTATGTATACGACCGACCACCGTACATGTACCCTGCACCAACGGATAATCATTGCCCCCCTCTCATGAGCACTGCAACGTATAACATGTCTCCCAGCCTTGGCAACTACTTTGGAAATGGGTATCAGTACCAAGCCACTTATCTCCACTAG 1641 0.4284 MEDSDSVATLMDSTTSKIQQLQKAFAELENYRAVTLNMKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKTMKARQLLEKREAAVFAKEQASFQRIQEKRDAAVFAIVNAREKHRKISSRELATVSNGGKVGIVVVEEKPVDNVSTAAECNVEDVKLPENGNVELVSYPELVKLCKEMDAAGIHKFISDNRKNLAAVRDEIPNALRAAPNAARLVLDSLEGFYCTEVSNQDVKKDANLLGLRRTCIMLMECLCDFLSNSDCVSNVISEDIKDRAKAVAEEWKPRLDALDMDASNGNSLEAHAFLQLVASFGIASGFDEEELSRLIPMVSRRRQTADLCRFLGLSEKMSGVIEVLVNSGRQIDAVNLAFAFDLTEQFSPVTLLKSYLKDARKASSPVKSVNSSPTAQIEVNERELVALKAVIKCIEEHKLDEQYPLDPLQKRLIQLEKAKADKKRETEATKPQPKRPRANGAGYGPRVTNIPCDKTSYARVADRYPQYVYDRPPYMYPAPTDNHCPPLMSTATYNMSPSLGNYFGNGYQYQATYLH* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0839 546 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 3 546 - -
Vra9g0839 546 Coils Coil 51 81 - -
Vra9g0839 546 Coils Coil 11 31 - -
Vra9g0839 546 Pfam Frigida-like protein 168 457 IPR012474 -
Vra9g0839 546 MobiDBLite consensus disorder prediction 450 477 - -
Vra9g0839 546 PANTHER FRIGIDA-LIKE PROTEIN 3 546 - -
Vra9g0839 546 Coils Coil 436 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0839 Vra-Chr9 9834094 9839868 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0839 - - gmx:100786746 979.548