Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0835 ATGGACTTAAACGGTGCTGTTGAGGACATAATGCCTTGGGAAGGGACTCTATCTTCAAGTGATTTTTTCCTTTCTGCTCGTACATTTTCTGAGAAGTGGAAAATGTTCAATCCTTCCTTTCCTCCATGGCAGTGGATCCTGTGTCCTAAACAGCATTTGGTTGCTTCTCATAAGGTGGAAGGATACTTGTCCATGGAGAACATGTGCCATATCAAATCAAGTGAGGTAGAAGATTGTAATAGAAGTCTGACATGGAAAGAAGATAGCAACGATTCGCAGAGAGAAGAGCCCTTTGATTGTGGCACTTTAGTATGTCCAGAGCATGAAGTAAACCACTATGATTTTCACATCGTCTACAGTTCTTCATATAGAGTTCCAGTCCTGTATTTTCGTTCATACCATAGTGATGGGCAACTATTGTCTTTCAATGAAATTGAAAAGGATCTTCCCTGTAACTCTGCAAAGTTACTATTAGAATCGAAATGGACATTTATAACTCATGAGGAACATCCACATTTGAATAGACCATGGTACAAATTACATCCATGTGGGACGAGTGAATGGATGAAGCTCCTCTTCGACGGTGATTCATCTTTGAACAGAAATGGTTTTGTTATTGAACGCTATCTGGTTTCCTGGTTCTCGGTCATTGGACAAGTAGTTGGTCTCAAAATTCCTTTGGAAATGCTGGATACTGTAGTTTCTAACGATTCTTAG 717 0.3989 MDLNGAVEDIMPWEGTLSSSDFFLSARTFSEKWKMFNPSFPPWQWILCPKQHLVASHKVEGYLSMENMCHIKSSEVEDCNRSLTWKEDSNDSQREEPFDCGTLVCPEHEVNHYDFHIVYSSSYRVPVLYFRSYHSDGQLLSFNEIEKDLPCNSAKLLLESKWTFITHEEHPHLNRPWYKLHPCGTSEWMKLLFDGDSSLNRNGFVIERYLVSWFSVIGQVVGLKIPLEMLDTVVSNDS* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0835 238 Gene3D - 56 224 - -
Vra9g0835 238 Pfam Autophagocytosis associated protein, active-site domain 29 226 IPR007135 GO:0019787
Vra9g0835 238 PANTHER AUTOPHAGY-RELATED 10, ISOFORM B 10 229 - -
Vra9g0835 238 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 10 229 IPR007135 GO:0019787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0835 K17888 - gmx:100808589 419.083