Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0827 ATGGCGGAGCAGCGCGAGAAGCTTCACATTGTGGTGTTTCCATGGCTAGCATTTGGTCACATTGCTCCATTTTTTGAGCTTGCAAAACTCATAGCTCAAAAGGGTCACAAAATTTCTTTCATTTCCACACCTAGAAATATCCATCGCCTACCCAAANTGCCTGAAAACTTGCAANCTTTGGTGGATCTGATAGAANTNCCACTGCCCCGTGTTGACAAACTCCCAGAAAATGCAGAGGCCACAATGGACATTCCTCATCACCTCATTCCATACCTCAAGCTGGCTTTTGATGCTCTTCAACAACCTTTGGCCATATTTCTGGAGAGATGCAAACCCCATTGGATAATATACGACTTTGCACCGTATTGGTTGCCGCCAANNNNTTCTAAGCTAGGAATCTCANGCNTCTTNTTCTNTATTTTTAGTGTATCTGGTTCNANNNCTTTTTTAGAATCTGTTAGAAGAACAACCAGTGGCAGTGAGGCTTCGTGGGGCAAAGATTTTCCTGAAGAGCATAATGAGACAAATGAATCGGGGGTTTCTGACGTTTTTCGAGTCCTTACAACTTCTGATGCTGCTCAAGTTATTGCTCCAAGAAGTTGCATGGAGATTGAAGGTGAGGCTCTTAAAGTTTATAAAAGTATGTATAGTAAACCAGTAATTCCAGTTGGGTTACTGCCACCTTCATTACAGTTCAGCGAAGACAGGAATGATGAAAACTGGAATACCATACTTAATTGGTTAGACAAACAGGAAGAAGGATCAGTGATGTATGTAGCTTTTGGAAGTGAAGTGACACTAAGCGATGAAGAGTTTATTGAAATTAGTATGGGAATAGAAATGTCTGGTTTTCCCTTTTTTTGGGTTCTTAAAAAGCAAAACACCTCTAAGGTTGAGTTGCAGGATTTGGTTGTGAATAACTCAGGAAAGGGTTTGGTGTGGAGAACATGGGCACCACAGACGAGGATTTTAGCACACAAGTCTGTTGGGGGATTCCTGACTCACTGTGGTTGGAGTTCAGTCATAGAGAGTCTTCAAGTTGGTTGTCCACTTGTTATGTTGCCATTCCAAAATGAACAATTTTTAATTGCTAAGCTTATGGAAGAGAAAAGGGTAGGTGTCAAAGTACAGAGAAGTGAGGATGATGGGAAGTTCACCAGGGAATCGTTGGCCAATGCATTAAGATCAGTGATGTTGGAAAAAACTTATAGAAGTGAAGCAGAGGAAATGAGTAAGATATTTGGGGACAAAGAACTGCATCAAAAATATATAGATGAGTTTGTTGAATATATGGAAATCCACAGGCCAACCATAAAGGAGTAG 1323 0.4044 MAEQREKLHIVVFPWLAFGHIAPFFELAKLIAQKGHKISFISTPRNIHRLPKXPENLQXLVDLIEXPLPRVDKLPENAEATMDIPHHLIPYLKLAFDALQQPLAIFLERCKPHWIIYDFAPYWLPPXXSKLGISXXXFXIFSVSGSXXFLESVRRTTSGSEASWGKDFPEEHNETNESGVSDVFRVLTTSDAAQVIAPRSCMEIEGEALKVYKSMYSKPVIPVGLLPPSLQFSEDRNDENWNTILNWLDKQEEGSVMYVAFGSEVTLSDEEFIEISMGIEMSGFPFFWVLKKQNTSKVELQDLVVNNSGKGLVWRTWAPQTRILAHKSVGGFLTHCGWSSVIESLQVGCPLVMLPFQNEQFLIAKLMEEKRVGVKVQRSEDDGKFTRESLANALRSVMLEKTYRSEAEEMSKIFGDKELHQKYIDEFVEYMEIHRPTIKE* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0827 440 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 429 - -
Vra9g0827 440 PANTHER UDP-GLYCOSYLTRANSFERASE 91B1 4 437 - -
Vra9g0827 440 CDD GT1_Gtf-like 8 413 IPR002213 GO:0008194
Vra9g0827 440 Gene3D Glycogen Phosphorylase B; 1 247 - -
Vra9g0827 440 ProSitePatterns UDP-glycosyltransferases signature. 317 360 IPR035595 -
Vra9g0827 440 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 252 419 IPR002213 GO:0008194
Vra9g0827 440 Gene3D Glycogen Phosphorylase B; 248 416 - -
Vra9g0827 440 PANTHER EG:EG0003.4 PROTEIN-RELATED 4 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0827 Vra-Chr9 9718913 9720391 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0827 7 435 Glycosyltransferase AT2G22590 43.913 1.16e-126 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0827 - - lja:Lj0g3v0150839.1 609.372