Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0817 ATGTCTTCGCAGCAACAGCAAATGCAGAATAGTGGCGGCGGCGGCGGCGGTGGCAGCATGGGCATCCCAGCGAGCGAGATTTTCTGGACTCTGGCCGATAAAGCCGACAAAAAGTTCTCCAAAATCAGGGACATTCCTTTTTACCAGCGCAGCAGGCGTGATACGTACTTTTACAAGGTCTTCAAGGTTTACACACAATTGTGGAAGTTTCAGCAGGAGAATCGGCAGAAGCTAGTTGAAGCTGGGCTTAGGAGATGGGAAATTGGTGAGATTGCATCTCGCATTGGGCAACTGTATTTTGGGCAGTACATGCAAACAAGTGATGCAAATTATCTGTCAGAGTCATATATATTCTATGAGGCCATATTGACTCGGGAGTATTTTAAGGAGGGAATGTTTCAGGATGTGAATATTGCAAACAAACAATTGAGGTTTCTTGCTAGATTCATAATGGTGTGTTTGGTTTTGAATCGGAGGGAAATGGTACAACAATTGGTTAATCAGCTTAAAGTATTAGTTGATGAATGCAAGAGAGCATTCCAGGAAAGTGACTTTAAAGAATGGAAGCTGGTGGTTCAAGAAATAGTCAGATTTTTAAAAGCTGACACTGCTTTTATGAATATGAGGCCGTTAAGATATAGTTTAGTTTTGGACTCTCATCCTGATACCTTGCCACATGTTCCTGCAGCCATTACAAAGCGACATTTGAAACTACGAGATGCTGTATTAAGTAGCTTCCATCAAAATGAGGTAAAGTATTCAGAGCTCACAGTGGACACTTTTAGGATGCTTCAATGTCTGGAGTGGGAACCTAGTGGCTTATTTTACCAGTCCAGTGGTTCAAAACTTAGCCAGAATGGGGCTACTGGGACTAGTCGCATCAGTTACATCCAGGACATTGCTGATCCTACTTTACCAGCAAATCCACGGAAAGCTGTATTATACCGTCCTGCACTGACACATTTTATAGCCGTTCTTGCCACAATATGTGAGGAGCTTCCTTCCGATGGTATTCTCCTTGTGTATTTGTCAGCTTCAGGATATTGTAGTTCTCCTCAGAATGAATCTGGTTGCATACACCTTGGTTCTCATGGAGAGAGAGGATCAAACTGCGTATATCCTTCTGACTTTCTACCATTTACTAGAAGACCACTTCTTTTAGTCATTGATAATGACAATAGCAACGCATTCAAGGTGATAGCAGACGCAGAAAAGGGAGAGCCAGTTGCAATGCTCCTTTCACCAAGCTGTTCTCCTGCTGTGTCTGACTGCTCACATTCAAATGGGAGCCTATTCACCATGTTTCTTACAGCTCCGCTGCAAGCTTTCTGTCTTCTGATTGGACTTTCAGATACTGATATTGATTTGGACACATTCAACAAAGCTGAAGCGATACTCACATCTTCACTAAATACCTGGGGGCTAGCATTGGCAATATCAAACACACTTAATCCTGTTTGGGGGCAGATTTTAGGTGATCCCTTTATTAGGAGGCTTATTTTGAGATTCATGTTTTGTCAGGAAGTGTTGACCCTATATGCACCAGTTTACAAAGAGAACAAATTCCTTCCGACATGTGTCCCTGCTCTTCCGATGCCTGCCATGCCTCCAACTTACTCATATGAGAGTGTAATTCTGAATGTAGCCAGCATGTTTGGTGCAACTAAGTATTTCATCTTCTCAGAGGATGTTGTTCGTCCCGAAAATTTAGAAGTCGACTTGAATCAGTTGACTCTATGA 1740 0.4264 MSSQQQQMQNSGGGGGGGSMGIPASEIFWTLADKADKKFSKIRDIPFYQRSRRDTYFYKVFKVYTQLWKFQQENRQKLVEAGLRRWEIGEIASRIGQLYFGQYMQTSDANYLSESYIFYEAILTREYFKEGMFQDVNIANKQLRFLARFIMVCLVLNRREMVQQLVNQLKVLVDECKRAFQESDFKEWKLVVQEIVRFLKADTAFMNMRPLRYSLVLDSHPDTLPHVPAAITKRHLKLRDAVLSSFHQNEVKYSELTVDTFRMLQCLEWEPSGLFYQSSGSKLSQNGATGTSRISYIQDIADPTLPANPRKAVLYRPALTHFIAVLATICEELPSDGILLVYLSASGYCSSPQNESGCIHLGSHGERGSNCVYPSDFLPFTRRPLLLVIDNDNSNAFKVIADAEKGEPVAMLLSPSCSPAVSDCSHSNGSLFTMFLTAPLQAFCLLIGLSDTDIDLDTFNKAEAILTSSLNTWGLALAISNTLNPVWGQILGDPFIRRLILRFMFCQEVLTLYAPVYKENKFLPTCVPALPMPAMPPTYSYESVILNVASMFGATKYFIFSEDVVRPENLEVDLNQLTL* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0817 579 Coils Coil 162 182 - -
Vra9g0817 579 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 6 348 - -
Vra9g0817 579 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 353 571 - -
Vra9g0817 579 Pfam Protein SCAI 31 354 IPR022709 GO:0003714|GO:0006351
Vra9g0817 579 Pfam Protein SCAI 358 514 IPR022709 GO:0003714|GO:0006351
Vra9g0817 579 PANTHER PROTEIN SCAI 353 571 - -
Vra9g0817 579 PANTHER PROTEIN SCAI 6 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0817 Vra-Chr9 9529366 9540133 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0817 - - gmx:100810202 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0817 9 9529366 9540133 Vra9g0817 9 9529366 9540133 ECH