Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0813 ATGAATAGCTCAGGTGGCTTACTGCCGCCAATGTCACCAACTCCACTATTCCCTTGGCTGCTAAATGCTCCAAAACCACCACCTGAAGCAGCTCCAGCAAATCCCCCATTTGAAGGAACAGCACCGGCAAATCCTACACCAGAAAATCCACCACCAGTGGATGCAACACCAGCAAACCCTCCACCAATGGCAGTGTTAGTAGAACTACTTCCAGCAAATCCACGACCAAAAGCACTGGGAGGGGAAAAACCACTTCCAGGTAAGGAGTGGACGAAAACGCAAATAAGAAAGATAACAGATCAAGTTTTTGAAAAAGTACAGAATCAAAAGGAAAGTGATAGGTTGAGTTTTGAAGAACTGTATATTGCTGTTTTACTCGTGTACAATGATATCAACAAGTATATACCTGGTCCCCATGTTGACCCTCCATCAAAAGCCAGAGTCGAAGAAGTCAAAGAGAAATGTGATATCAACCTTGATGGGGATATTGAGCGTGAAGAATTTTTCGACTTCATGCTTCAAATGACAGCTGATACATTCACTGTTGTTAGCCAAAAACTTGTTGTCACTATGGTTGTAGCATCAACAGTTGCAGTGGCAACAAAGAAAGCCACTGAGGGTGTTCCAGGTGTTGGGAAAGTGGTGAAGAAGATACCAAATTCAGTTTGTGCTTCCCTTGCAATCATTGCAGCTGTGTGGTTCAAGAAAAAGGCTCAAAGTTCTTCTCTGTAG 732 0.4344 MNSSGGLLPPMSPTPLFPWLLNAPKPPPEAAPANPPFEGTAPANPTPENPPPVDATPANPPPMAVLVELLPANPRPKALGGEKPLPGKEWTKTQIRKITDQVFEKVQNQKESDRLSFEELYIAVLLVYNDINKYIPGPHVDPPSKARVEEVKEKCDINLDGDIEREEFFDFMLQMTADTFTVVSQKLVVTMVVASTVAVATKKATEGVPGVGKVVKKIPNSVCASLAIIAAVWFKKKAQSSSL* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0813 243 MobiDBLite consensus disorder prediction 1 62 - -
Vra9g0813 243 ProSiteProfiles EF-hand calcium-binding domain profile. 143 178 IPR002048 GO:0005509
Vra9g0813 243 PANTHER S100 CALCIUM-BINDING PROTEIN 84 240 - -
Vra9g0813 243 MobiDBLite consensus disorder prediction 11 59 - -
Vra9g0813 243 PANTHER CALCIUM-BINDING EF HAND PROTEIN 84 240 - -
Vra9g0813 243 SUPERFAMILY EF-hand 100 180 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0813 Vra-Chr9 9499572 9503916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0813 85 233 EF-hand Containing Proteins AT1G64850 60.403 1.09e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0813 - - vra:106774274 415.616