Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0812 AAGGAGTGGAGGAAAAGGCAAATAAGAAAGATAACAGATCGAGTTTTTGAAAAAGTACAGAATCAAAAGGAAAGTGATAAGTTGAGTTTTGAAGATCTGTATATTGCTGTTTTACTCGTGTACAATGATATCAACAAGTATATACCTGGTCCCCATTTTGACCCTCCATCAAAAGTCAGAGTCAAAGAAGTCAAAGAGAAATGTGATATAAACCTTGATGGGGATATTGACCGTGAAGAATTTTTCGATTTCATCCTGCAAATGACAGCTGATACATTCACTGTTGTTAGCCAAAAACTTATTGTCACTATGGTTGTAGCACCAACAGTTGCAGTGGCAACAAAGAAAGCCACCGAGGGTGTTCCATGTGTTGGGAAAGTGGTGAAGAAGATACCAAATTCAGTTTATGCTTCCCTTGTAACCATTGCAGCTGTGTGGTTCCAGAAAAAGGCTCAAAGTTCTTCACTGTAG 471 0.3864 KEWRKRQIRKITDRVFEKVQNQKESDKLSFEDLYIAVLLVYNDINKYIPGPHFDPPSKVRVKEVKEKCDINLDGDIDREEFFDFILQMTADTFTVVSQKLIVTMVVAPTVAVATKKATEGVPCVGKVVKKIPNSVYASLVTIAAVWFQKKAQSSSL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0812 156 PANTHER CALCIUM-BINDING EF HAND PROTEIN 1 153 - -
Vra9g0812 156 PANTHER S100 CALCIUM-BINDING PROTEIN 1 153 - -
Vra9g0812 156 SUPERFAMILY EF-hand 14 88 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0812 Vra-Chr9 9494609 9498472 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0812 1 146 EF-hand Containing Proteins AT1G64850 65.753 4.44e-71 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0812 - - vra:106774274 260.766