Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0796 ATGTCCACTCTGCAACTTCACTCCGCTCCCACTTCTTCCTCTTCGTTCGCTCCAATCACCACTTCTCGCTTACTCCAAACCTCTCGCGTCTCGCTCCGAAACGCCGTCCGCTGCAAGGCGATAGAAGCAGTGCAATTGGAGAACGGGAGGCCGAGCGCCAGCGAGTTCGTCGTCAGCGGAAACGCGATTCCGAGCTACGTCGTGGCGCCGAACGCGCGGATTCGTGATTTGGTTCACCGGAGCGACACGCGTCTGAGAATATTCTCCGGCACCGCTAATCCCGCGCTTTCTCAGGAAATTGCGTGCTACCTGGGTCTGGAGCTTGGAAAAATTAAGATAAAGCGTTTTGCTGATGGCGAGATATATGTTCAGCTCCAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCAAATGAGAATCTTATGGAGCTTCTCATAATGATTGATGCTTGCAGAAGAGCTTCAGCAAAAAATATTACTGCTGTCATTCCATATTTTGGATATGCCAGAGCTGATAGAAAGACTCAAGGGCGTGAATCCATTGCTGCAAAGCTTGTAGCAAATTTAATTACAGAAGCGGGTGCAAATCGTGTACTTGCTTGTGATCTTCATTCTGGGCAGTCCATGGGTTATTTTGATATTCCAGTTGATCATGTATATGGACAGCCTGTCATACTTGATTACCTTGCCAGCAAAACTATTTGTTCAGACGATTTGGTAGTTGTCTCACCAGATGTTGGTGGTGTTGCCAGAGCACGTGCTTTTGCCAAAAAATTATCTGATGCTCCCTTAGCTATTGTTGATAAAAGGCGTCATGGGCATAATGTTGCGGAGGTGATGAATTTGATAGGCGATGTAAGGGGAAAGGTAGCAGTTATGGTAGATGACATGATTGATACTGCTGGGACTATTGCCAAAGGGGCAGCTCTGTTGCATCAAGAAGGGGCAAGGGAAGTCTACGCATGCACCACGCATGCTGTTTTCAGTCCTCCTGCTATAGAGAGGTTATCAAGCGGTTTGTTTCAAGAAGTTATCATAACTAACACAATTCCAGTGGCAGAACAAAACTATTTCCCCCAATTAACTGTCCTGTCGGTGGCAAACCTTCTGGGCGAGACTGTTTGGCGAGTTCATGATGATTGCTCAAAATCCAAATCGTGCACAATTTTTAAACGGGTAGATGTAGAGGAGGACGTAGAAGAGGAATGTGGTGATGAGACTAAGCAACAACTAGAAGTGGCAAAGAAAGAAGTTTTCCACGTGCGGAAGAAACTATTTGCAGAGAGAAGAAAGGGTTTGATTTTGCTTTGTGTTGTAGTACTATGTTGGGCAATTATAATATGGTTGTGTAATGTGCAGCCCAAATCACTTTGA 1395 0.4616 MSTLQLHSAPTSSSSFAPITTSRLLQTSRVSLRNAVRCKAIEAVQLENGRPSASEFVVSGNAIPSYVVAPNARIRDLVHRSDTRLRIFSGTANPALSQEIACYLGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVAEQNYFPQLTVLSVANLLGETVWRVHDDCSKSKSCTIFKRVDVEEDVEEECGDETKQQLEVAKKEVFHVRKKLFAERRKGLILLCVVVLCWAIIIWLCNVQPKSL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0796 464 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 85 395 IPR037515 GO:0004749
Vra9g0796 464 Pfam Phosphoribosyl synthetase-associated domain 286 391 IPR005946 GO:0000287|GO:0004749|GO:0009165
Vra9g0796 464 CDD PRTases_typeI 244 356 IPR000836 -
Vra9g0796 464 SUPERFAMILY PRTase-like 150 386 IPR029057 -
Vra9g0796 464 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 85 201 IPR029099 -
Vra9g0796 464 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 209 224 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Vra9g0796 464 Gene3D - 228 371 IPR029057 -
Vra9g0796 464 SMART Pribosyltran_N_2 85 201 - -
Vra9g0796 464 TIGRFAM ribP_PPkin: ribose-phosphate diphosphokinase 86 390 IPR005946 GO:0000287|GO:0004749|GO:0009165
Vra9g0796 464 Gene3D - 88 386 IPR029057 -
Vra9g0796 464 PANTHER RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 2, CHLOROPLASTIC 45 391 - -
Vra9g0796 464 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 45 391 IPR005946 GO:0000287|GO:0004749|GO:0009165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0796 Vra-Chr9 9305649 9316967 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0796 K00948 - gmx:100816430 710.679