Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0793 ATGGCTTCAATGCCTGGAATCCTCACAGATTGGCCATGGAAGCCTCTCGGAAGCTTTAAGTATGTGGTGTTACTTCCATGGGTGGTTCACAGCAGTTATTCAGTGATGGTGAAAGATGAGAAAGAAAGGGATGTGAGCACTTTTCTGATATTACCATTTTTGCTTTGGCGAATGCTTCATAATCAGATATGGATCACTCTCTCTCGTTACAGAACAGCCAAAGGAAATGGTAGAATTCTCGATAAAGGACTTGAATTTGAACAAGTTGATAGAGAAAGAGAATGGGATGATCAAATATTGTTGAATGGATTACTATACTACTTGGCCTGCTACACATTACGTGGTGCTTCTCATCTTCCATTATGGAGAACAGATGGAATGGTTATGGCAATGCTGATTCATGCAGGACCAGTGGAGTTTCTGTATTATTGGTTACACAGAGCACTTCATCACCATTTTCTATATTCCAGATATCATTCTCATCACCATTCTTCCATTGTCACAGAACCTATAACTTCTGTGATTCATCCATTTGCAGAACATATATCATATTTTCTTCTGTTTTCAATGCCGATGTTAACCCTAGTATTCACAAACACAGCTTCTGTGGGGGCCATGGTCTTGTATGTCACTTACATTGACTTCATGAATAACATGGGTCACTCAAACTTTGAGGTTGTCCCAAAATGGCTCTTTGCCATCTTTCCTCCTCTCAAATATCTCATCTACACCTCATCGTTTCATTCTTTGCATCATACCCAGTTCAGAACAAACTACTCCTTGTTCATGCCACTTTACGACTACATCTATGGCACCACTGATAAAGCTTCTGATACATTACACGAATCTGCATTAAAACGAGAAGAAGAAACTGCAGATGTTGTGCACCTTACGCATCTCACAACTCCTGAATCTATCTATCATATCAGACTTGCATTTGCTTACTTGGCTTCTAAGCCTTACACGTCAAAATGGTACCTCAATTTGATGTGGCCTCTCACAGCTTGGTCCATGATCCTCACATGGATCTATGGTAGAACATTCATTGTCGAGGGAAATCGTTTTCACAAACTCAAGTTGCAAACTTGGTCAATTCCCAAGTACACTCTCCAATACTTCATGCAATCACAAAAAGTGGGTATCAACACAATGATAGAAGAAGCAATACTTGATGCAGACAGAAAAGGCATAAAAGTGTTGAGTTTAGGTCTAAGAAATCAAGAAGAAGAGCTTAACATCTATGGAGGATTATTTGTTAGCAGACATCCAAAGTTAAAAGTTAAGGTTGTCGATGGAAGCAGTCTTGTAGTTGCTCTTGTTCTTAACACCATTCCCAAAGGAACAACTCAAGTGTTACTTAGAGGAAAACTTACTAAGGTTGCTTATGCTCTTGTCTTCTCATTGTGTCAACAAAGTATTCAGGTTGCTACATTGCATGAAGATGATTATGTGAGGCTTAAGAAGTCAATCAAAGGCTCTGAAACTAATTTGACCTTTTCCAAAAGTAGCACACAGAAGATTTGGTTGGTAGGAGATGAATTGACTGAAGAAGAACAGCTAAAGGCACCAAAAGGAACATTGTTCATTCCATACACACCATTTCCACCAAAGAAATATCGCAAGGATTGCTTCTACCATTCCACCCCAGCAATGCTAGCTCCTCCTTCAGTTCAAAATATCCATTCTTGTGAGGATTGGTTGGCAAGAAGGGTAATGAGTGCATGGCGTATAGCAGGAATAGTACACTCTCTTGAAGGATGGAATGAACATGAATGTGGTCATACTATGAATGACATAGACAAAGTTTGGCATTCAACTCTTCAACATGGATTTCAACCTCTTCAAGTGCAAGAGCAAGTCAAAGAGTTAGCTCAATATTATTAA 1884 0.3938 MASMPGILTDWPWKPLGSFKYVVLLPWVVHSSYSVMVKDEKERDVSTFLILPFLLWRMLHNQIWITLSRYRTAKGNGRILDKGLEFEQVDREREWDDQILLNGLLYYLACYTLRGASHLPLWRTDGMVMAMLIHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHISYFLLFSMPMLTLVFTNTASVGAMVLYVTYIDFMNNMGHSNFEVVPKWLFAIFPPLKYLIYTSSFHSLHHTQFRTNYSLFMPLYDYIYGTTDKASDTLHESALKREEETADVVHLTHLTTPESIYHIRLAFAYLASKPYTSKWYLNLMWPLTAWSMILTWIYGRTFIVEGNRFHKLKLQTWSIPKYTLQYFMQSQKVGINTMIEEAILDADRKGIKVLSLGLRNQEEELNIYGGLFVSRHPKLKVKVVDGSSLVVALVLNTIPKGTTQVLLRGKLTKVAYALVFSLCQQSIQVATLHEDDYVRLKKSIKGSETNLTFSKSSTQKIWLVGDELTEEEQLKAPKGTLFIPYTPFPPKKYRKDCFYHSTPAMLAPPSVQNIHSCEDWLARRVMSAWRIAGIVHSLEGWNEHECGHTMNDIDKVWHSTLQHGFQPLQVQEQVKELAQYY* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0793 627 Pfam WAX2 C-terminal domain 451 613 IPR021940 -
Vra9g0793 627 PANTHER STEROL DESATURASE 1 617 - -
Vra9g0793 627 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 1 617 - -
Vra9g0793 627 Pfam Fatty acid hydroxylase 137 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0793 Vra-Chr9 9241581 9250464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0793 1 614 Lipid Metabolism Gene Families AT1G02190 58.013 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0793 K15404 - gmx:100818020 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0793 9 9241581 9250464 Vra9g0793 9 9241581 9250464 ECH