Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0792 ATGGCTTCAAAACCTGGCATACTCACCAATTGGCCATGGAAGCCTCTCGGGAGTTTCAAGTGGGTGATTTTGACACCATGGATTGTGCACAGCACTTACTCCTTCATAGTGAATGATCCAAAGAAGAGAGACCTTGGTTACTTCCTCATCTTCCCCTACATGTTGGTCAGGATGCTGCATGACCAACTTTGGATCACACTTTCCCGCCATAGAACGGCCAAAGGCAAAACCAGAATCGTTGATAAGGGCATTGAGTTCGAACAAGTCGATCGAGAAAGTAACTGGGATGACCAGATCTTGTTCAATGGGATATTGTTCTACGTAGGTTCTATGTTAATTCCAGAAGCTTCTCAGATGCCCTTGTGGAGATTGGATGGTGTGGTTATCACTGCTCTTTTACATGCAGGACCAGTGGAGTTTCTGTATTATTGGTTGCACAGAGCACTTCATCACCATTTTCTATATTCTAGATATCATTCTCATCACCATTCTTCCATTGTCACAGAACCTATTACTTCTGTGATCCATCCATTTGCAGAGCACATAGCATACTTTTTGTTATTTGCCATTCCACTCTATTCAACTGTCGTCACAAGAACAGCTTCCATAGCATCCTATGCTGGTTATCTTGCATACATTGACTTTATGAACAACTTGGGTCACTGCAATTTTGAGTGTATTCCAAACTCCATTTTCTCAACACTTCCCTTCCTAAAGTATCTCATGTACACTCCATCGTTTCACTCACTGCATCATACCCAGTTTAGGACAAATTACTCACTGTTCATGCCAATTTATGATTACATGTATGGTACCATGGACAAGAGCACAGACAGCACATATGAAACATCATTGAAGAGAGAAGAAATTTCACCTGATGTTGTTCATCTGACACATCTCACAACACCAGAATCCATTTTTCATCTGAGGTTGGGATTTGCTTCCTTAGCCTCAAAACCACAATCTTCAACATGGTACCTTTATTTGATGTGGCCTTTCACTCTTTCCTCTGTTCTTGTCACTTTGTTTTATGCCCAAACCTTTGTCATCGAGAGGAATGCTTTTAAAATGCTCAATTTGCAATCATGGGTTATACCTAGATTCCATGTCCAATACCTTTTCAAATGGCAAAGTGAAACTCTTAACAAACTTATACAAGATGCAATACTTCAAGCAGAGTCGAGCAATGCAAAGGTTCTAAGTCTAGGTCTTTCAAATCAGGGAGAATCACTGAATAAATATGGTGAACTTTATATCAAAAGGTTTCCTGAGCTTAAGATAAAGATTGTGGATGGCAGTAGCTTAGTTGTGGCCATTGTTCTTAATAGCATTCCTAATGAAGCAAGTGAAGTGCTTCTTTGTGGAAAACCTAATAAGGTTTCATATGCCATTGCTACTGCTTTATGTGAAAAGGGTACAAAGGTTACAACTATGTACAAAGATGAATATGATGATCTTGAATTAAGACTCTCCGATGAGTGCAAAAAGAACTTGGTTTTCCCAGGATCCTACACTGCAAAAATTTGGCTTGTCGGAGAACAATGTAATGAAGCAGAACAAAAGAAAGCAGCAAAAGAATCATTGTTCATTCCTATTTCCCAATTCCCTCCAAAGAAACTTCGTAAAGACTGCTACTATCACAGCACACCAGCCATGATAGCTCCACCTTCATTGGTCAATGTGGATTCTTGTGAGAACTGGCTGCCGAGGAGAGTGATGAGCGCGTGGCGCGTGGCCGGAATAGTGCATGCCCTAGAAGGTTGGAACGTTCACGAATGTGGAAATTTGACGTTTAGCGTTGAGAAAATATGGCAAGCAAGTCTTGGACATGGCTTTAGGCCATTCAATATTAATTCCTTTTCTTCAATTCTTAATCAATTACCATAA 1887 0.4038 MASKPGILTNWPWKPLGSFKWVILTPWIVHSTYSFIVNDPKKRDLGYFLIFPYMLVRMLHDQLWITLSRHRTAKGKTRIVDKGIEFEQVDRESNWDDQILFNGILFYVGSMLIPEASQMPLWRLDGVVITALLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLYSTVVTRTASIASYAGYLAYIDFMNNLGHCNFECIPNSIFSTLPFLKYLMYTPSFHSLHHTQFRTNYSLFMPIYDYMYGTMDKSTDSTYETSLKREEISPDVVHLTHLTTPESIFHLRLGFASLASKPQSSTWYLYLMWPFTLSSVLVTLFYAQTFVIERNAFKMLNLQSWVIPRFHVQYLFKWQSETLNKLIQDAILQAESSNAKVLSLGLSNQGESLNKYGELYIKRFPELKIKIVDGSSLVVAIVLNSIPNEASEVLLCGKPNKVSYAIATALCEKGTKVTTMYKDEYDDLELRLSDECKKNLVFPGSYTAKIWLVGEQCNEAEQKKAAKESLFIPISQFPPKKLRKDCYYHSTPAMIAPPSLVNVDSCENWLPRRVMSAWRVAGIVHALEGWNVHECGNLTFSVEKIWQASLGHGFRPFNINSFSSILNQLP* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0792 628 PANTHER STEROL DESATURASE 1 617 - -
Vra9g0792 628 Pfam WAX2 C-terminal domain 451 614 IPR021940 -
Vra9g0792 628 Pfam Fatty acid hydroxylase 138 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Vra9g0792 628 PANTHER VERY-LONG-CHAIN ALDEHYDE DECARBONYLASE CER1 1 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0792 Vra-Chr9 9219573 9229058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0792 1 615 Lipid Metabolism Gene Families AT1G02190 55.840 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0792 K15404 - gmx:100790115 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0792 9 9219573 9229058 Vra9g0792 9 9219573 9229058 ECH