Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0786 ATGACGAGCATGGAGAGTTTAATCGGTTTGGTGAACAGAATCCAGCAGGCCTGCACCGTGCTCGGCGACTACGGCGGAGACGCCGATAACAACGCCTTCTCTTCACTATGGGAAGCTCTTCCTTCTGTCGCCGTCGTCGGCGGCCAGAGTTCGGGTAAGTCTTCGGTTCTGGAAAGCATCGTTGGACGTGACTTTCTTCCTAGAGGATCAGGAATCGTGACGAGGCGTCCGTTAGTGTTGCAGCTTCACAAGGTTGATGGCAAAGCGAAGGAGTATGCAGAGTTTCTTCACATGCCAGGGAAAAAGATCACTGATTATGCTTTTGTTCGCCAGGAGATTCAGAATGAAACTGATAGAGTAACGGGGAAGACAAAGCAAATATCTCCTGTTCCAATTCATCTTAGCATTTACTCTCCACATGTTGTCAACCTAACTTTGATTGATTTGCCTGGATTGACTAAAGTTGCTGTAGAAGGACAGCCTCAGACTATTGTTGAAGACATTGAAAATATGGTTCGGTCTTATGTTGAGAAGCCTAATTGTATTATACTGGCAATATCTCCAGCGAACCAAGACATAGCAACTTCGGATGCTATTAAGCTTTCGAAGGAGGTGGATCCCTCTGGTGAGAGGACATTTGGAGTGTTGACAAAACTGGATTTAATGGACAAAGGAACTAATGCATTGGATGTCCTTGAAGGAAGATCTTACCGTCTGCAACATCCCTGGGTTGGTGTAGTAAATAGATCCCAAGCAGATATCAATAAAAACGTTGATATGATTGTTGCTAGGCGTAAGGAGAGTGAGTATTTCGAAACCAGTCCTGACTATGGACACTTAGCCAATAAAATGGGTTCTGTATACCTTGCAAAGCTTCTCTCACAGCATTTGGAGTCAGTAATTAGGGCACGAATACCCAGTATAACATCTTTGATAAACAAAACAATTGAAGAACTTGAATCAGAGATGAATCAGATTGGGAGACCAATTGCTCTTGATGCTGGGGCTCAGCTATACACCATCCTAGAACTATGCCGCGCATTTGATAGGATATTCAAGGAGCATTTAGACGGAGGGCGAGCAGGTGGAGATAAAATCTATAATGTCTTTGATAATCAGCTTCCTGCTGCGTTACGGAAGCTTCCATTTGACCGTCATCTATCTCTTCAAAATGTAAGGAAAGTGGTATCGGAGGCAGATGGTTACCAGCCTCACTTAATTGCCCCAGAGCAAGGTTACCGGCGCCTGATAGAGGGAGCTCTCAGCTACTTTAGAGGCCCAGCTGAAGCTTCAGTTGATGCAGTTCACTTTGTCTTGAAAGAACTTGTGAGGAAATCAATAGCTGAAACTCAGGAACTAAGACGTTTTCCAACTCTTCAAGCGGAACTAGCTGCAGCTACGAATGAGGCTTTAGAGAGGTTCCGTGAAGAGAGTAAGAAGACAGCTATTCGACTGGTCGACATGGAAGCTTCGTATCTCACTGTGGAGTTCTTCCGGAGACTTCCTCAAGAAATGGAGAAAGCCGGAAATCCAGCTAATCAAGCTACTCCCAATGAGGATCGATATGGAGAAGGACATTACAGGAGGATTGGATCAAATGTGACTTCCTATATTGGTATGGTGTCAGACACTCTCAAGAACACTATTCCAAAGGCTGTGGTTTTTTGTCAAGTCAGAGAAGCAAAACTATCATTGCTAAACCATTTCTACACACAAATAGGGAAGAAAGAGTCTAAACAGCTATCCCAGTTGTTAGATGAAGACCCTGCCTTGATGGAGAGGAGGCAACAATGTGCCAAAAGGCTTGAACTGTATAAAGCAGCAAGGGATGAAATTGATTCTGTTTCCTGGGCACGATGA 1860 0.4441 MTSMESLIGLVNRIQQACTVLGDYGGDADNNAFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKVDGKAKEYAEFLHMPGKKITDYAFVRQEIQNETDRVTGKTKQISPVPIHLSIYSPHVVNLTLIDLPGLTKVAVEGQPQTIVEDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLSKEVDPSGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGVVNRSQADINKNVDMIVARRKESEYFETSPDYGHLANKMGSVYLAKLLSQHLESVIRARIPSITSLINKTIEELESEMNQIGRPIALDAGAQLYTILELCRAFDRIFKEHLDGGRAGGDKIYNVFDNQLPAALRKLPFDRHLSLQNVRKVVSEADGYQPHLIAPEQGYRRLIEGALSYFRGPAEASVDAVHFVLKELVRKSIAETQELRRFPTLQAELAAATNEALERFREESKKTAIRLVDMEASYLTVEFFRRLPQEMEKAGNPANQATPNEDRYGEGHYRRIGSNVTSYIGMVSDTLKNTIPKAVVFCQVREAKLSLLNHFYTQIGKKESKQLSQLLDEDPALMERRQQCAKRLELYKAARDEIDSVSWAR* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0786 619 Pfam Dynamin GTPase effector domain 524 615 IPR003130 GO:0003924|GO:0005525
Vra9g0786 619 CDD DLP_1 40 306 IPR001401 GO:0003924|GO:0005525
Vra9g0786 619 Pfam Dynamin family 43 218 IPR045063 -
Vra9g0786 619 PANTHER DYNAMIN 1E-LIKE PROTEIN 3 618 - -
Vra9g0786 619 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 66 75 IPR019762 -
Vra9g0786 619 PRINTS Dynamin signature 40 58 IPR022812 -
Vra9g0786 619 PRINTS Dynamin signature 65 82 IPR022812 -
Vra9g0786 619 PRINTS Dynamin signature 138 155 IPR022812 -
Vra9g0786 619 PRINTS Dynamin signature 188 206 IPR022812 -
Vra9g0786 619 PRINTS Dynamin signature 207 223 IPR022812 -
Vra9g0786 619 PRINTS Dynamin signature 230 249 IPR022812 -
Vra9g0786 619 PANTHER DYNAMIN 3 618 IPR022812 -
Vra9g0786 619 Gene3D - 4 315 IPR027417 -
Vra9g0786 619 SMART dynamin_3 4 257 IPR001401 GO:0003924|GO:0005525
Vra9g0786 619 Pfam Dynamin central region 227 494 IPR000375 -
Vra9g0786 619 ProSiteProfiles GED domain profile. 527 619 IPR020850 -
Vra9g0786 619 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 37 306 IPR030381 GO:0005525
Vra9g0786 619 SMART GED_2 522 615 IPR003130 GO:0003924|GO:0005525
Vra9g0786 619 Gene3D Dynamin, middle domain 339 595 - -
Vra9g0786 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 314 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0786 Vra-Chr9 9096792 9104017 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0786 - - gmx:100790977 1150.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0786 9 9096792 9104017 Vra9g0786 9 9096792 9104017 ECH