Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0778 ATGGGAACAGCAAGTGAGTCAGATTTTGGTTATGTTCTGAGTGAAAGAAAAGCATTTGATGAAACAAAAGCTGGTGTCAAAGGGCTTGTTGATGCAGGTTACAAGAACGTTCCTGGCATATTCCGTCATCCTCCTCAGAAATCTGAGAAGAAGGTCTCAAATTTAACCGACACAAGCCATGTTATTCCAGTCATAGACCTTGCAGATATTCACAAGGATGCAAGCAAACGCCAAGGGCTTGTTGGCATAGTAAAGGAAGCATCTCAAACATGGGGTTTCTTTCAGGTGATCAATCATGACATCCCTGTGAGTGTTCTTGAGGAGATGCAAAATGGGGTCAAAAGGTTTCATGAACTTGATGCTGAACATAAAAGGGAATTCTATTCACGAGATAGAACAAAACCCTTTTTCTATAACAGCAATTTTGATCTATATGGCTCACAGCCAGCACTCAATTGGAGGGACACTTTTAAGTGTTTGTTGTACCCTGATGTCCCCAAACCAGAAGAAATTCCTGCAGTATGCAGAGACATACTGCTGGATTACAGTAAATACATAATGAAGCTTGGTATTTTACTGCTTGAGTTGTTTTCAGAAGCTTTGGATCTGAGTTCAAACTATCTCAAAGATATTGGATGTGCTGGGAGAGTGTTTGGTCTTTGTCATTATTATCCTGCATGTCCTGAACCTGATTTGACCATGGGAACCACCATGCATTCTGACAATGATTTCTTCACAATCCTTCTCCAGGATCATATTGGTGGTCTCCAAATAAGATGCAATGACAAGTGGATTGATATAAACCCTGTACCTGGTGCTTTGGTGGTTAATATTGGAGACTTTTTGCAGCTTATAACAAATGATAGATTGAAGAGTGCTGAACACAGAGTGCTTTCAAATGATGTTGGTCCAAGGATATCTGTTGCATGCTTTTTCAGCCCAAGTGTTGAGGCATCCTCAAAGCCTTTTGGACCTATAAAGGAACTGTTAAATGAAGACAATCCTCCCAAATATAGGGAAACTACATTTGCTGAGTATGAAGCCTTCTTTGTTGCAAAAGGACTTGATGGTACCAGTGCTCTTGCACCTTACAAGATTTGA 1101 0.4042 MGTASESDFGYVLSERKAFDETKAGVKGLVDAGYKNVPGIFRHPPQKSEKKVSNLTDTSHVIPVIDLADIHKDASKRQGLVGIVKEASQTWGFFQVINHDIPVSVLEEMQNGVKRFHELDAEHKREFYSRDRTKPFFYNSNFDLYGSQPALNWRDTFKCLLYPDVPKPEEIPAVCRDILLDYSKYIMKLGILLLELFSEALDLSSNYLKDIGCAGRVFGLCHYYPACPEPDLTMGTTMHSDNDFFTILLQDHIGGLQIRCNDKWIDINPVPGALVVNIGDFLQLITNDRLKSAEHRVLSNDVGPRISVACFFSPSVEASSKPFGPIKELLNEDNPPKYRETTFAEYEAFFVAKGLDGTSALAPYKI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0778 366 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 14 353 - -
Vra9g0778 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 162 IPR026992 -
Vra9g0778 366 Gene3D - 17 348 IPR027443 -
Vra9g0778 366 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 213 314 IPR005123 -
Vra9g0778 366 SUPERFAMILY Clavaminate synthase-like 23 357 - -
Vra9g0778 366 Pfam 2OG-Fe(II) oxygenase superfamily 221 314 IPR044861 -
Vra9g0778 366 PANTHER CME8 PROTEIN 14 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0778 Vra-Chr9 8973722 8976695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0778 15 366 Glycosyltransferase AT5G59530 55.367 5.14e-144 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0778 - - gmx:100792753 574.318