Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0773 ATGCTTGAGGACAAGAATGTGGAAAGTAAAAGCTTTGGACATCTAATGGCATCATCGGATGAAGAGGGTGAAATTATCCCAGTTGTTACTAGTTATTGGTTTGAAAATGAAAAGGAGGATTTTGTGTCACTTTGTAGTTTGACATTGTTATTTAGCATTAGTGAGATTGAATGTGACTTGGGAGAAAAAGTATTTTTGCGTGGCACAACCGGTGACAGCCTGCAGAAAATTTACAAACAGATCACAGGATGGAAATTTGAACTTACCTATGAGCAGCCTGAGATTTCAGTGCTTTCAAAGGACAGAAATTGGATAACACTCCAAAGACCAAGGAAGTGTTTTGAAAGTATAATTAGGACAATCTTGGTCACTGTATATTTTTTACATTTTCTGAGACGGAATCCAGAGGAATCTCAAATATCTATTTGGGACAAAATGAAGAAGGCCTTTAGCGCATTTGATATCATACCATCTGAAAATGATGTTCTAAATCATGTGAGTTTGATGAGAGAAGCTGTTAAAAGGGACAAAGATTTAACAAAATCAAAGTACCTGCTTGATTTAATGGAAAAGGGATGTTCAAATGAAGACTTCCATGAGTACAATGATGAGGAGAATGTACAATCTTATGAACTGAATCTCGTTGGAGAGCAAAATATTGGATATGATACTGTTTGTTCAATATGTGATAATGGTGGTGAAATACTTCCTTGTGAAGGAAGTTGTTTGAGATCCTTCCATGCAACTAAAGAGGCTGGTATAGATGCATTTTGTGAATCTCTTGGATACACCACTGCTCAAGTTAAGGCCTTTCCAAACTTTTACTGTCAAAATTGTAAATATAAGCAGCATCAGTGCTTCGCATGTGGCAAATTGGGTTCATCTGATGTATCATCTAAAGCTGAGGTATTTCCTTGTGTTACTGCAAATTGCGGTCTCTACTACCATCCTGACTGTGTAGCAAGGCTTCTCTGCCCTGGCATTGACACCGAACAAGATGAAATGAGAAAGAAAGTTGCCTTTGGCAAAGCATTTGTCTGTCCTCTTCATACATGCTCTTTATGCAAAAAGGGTGAAGTTAAAAATGTTCATCATTTGCAGTTAGCAATATGTAGACGCTGTCCTAAAGCTTACCACAGAAAATGTTTACCCAAGGAAATTTCTTTCACACTTGATTATGATAAGGGCATTGAGCAGAGGGCTTGGGATGGTTTACTTGATCATCGAATTTTGATATATTGCACGGACCATGAGATGGATAGCAAACTTGGGACTCCTGCAAGAGACCATCTGGTATTTCCTGATATAAAAGTCAAAAGGAAGAGTGTTAGCTTTCGAGAAGGGGATGTTGCCAAAGATGTGGAAAAAATATGTTGCAAGAAAGATACACTTTTCTCTAGTGCATCAGTCAAGTTTGATTGGTATAGAAAATATTTGAAGGTCAAAAATATGCCTGTGTCAAATCATTCCTCTCCAAGTCCTTCAAAAAAGCTACCTTTAAAGGGTGCTAACTTGTCGTGTAATTCAAGATTATGTGAAGCTAAATCTCTGCAGAAAAATTTGGTCTGTGCAAGAACTGACAAAACTGGCTTTGAGAAGCCTCTGGCAAACAAAATCCGAACATCTCTTGACTTTGATAATGCTGAAATGGAAAACAGTGTATTGTCTTTAGTGAAAGAATCCATGTCTACATTTAATGAGCAAGAATTCATTAAGAGCCATCAAGCCTTCTGTTCAACATCAGGTTTAACCGAAACTGAATTTCATAAAAACCTTACTCAAGGGAAAGTAGAAGGGTCAATTAAGGCTGTTCAAACAGCTTTGCAGAGGTTAGAAGAAGGATGTAGTATTGAAGAAGCAAAAACTATTTGTGACCCAGTGGTGCTCCATCAGCTTTTCATTTGGCAGAAGCAGATCAAGGTCTATCTTGCACCTTTTCTTCACGGCATGCGATATACTTCCTTTGGTCGCCATTTCACTAAAATAGACAAACTGAAGGAGGTTGTTAATAGGCTTCATTGGTACGTTCAGAATGGAGACACGGTTTTGGACTTCTGTTGTGGTTCTAATGACTTCAGTTGTCTAATGAAATCAAAGCTTGAACAGATGGGGAAGTCATGTTCATTCAAGAACTATGATTTATTCCAACCCAAGAATGATTTCAACTTTGAAAAGAGAGATTGGATGAGTGTCAATGCAGAAGAATTACCCCACGGTTCTAAACTTATCATAGGGCTGAATCCTCCTTTTGGGGTGAAGGGTTGTCTTGCTAACAAATTTATTAACAAGGCATTGACTTTCAATCCAAAACTTCTTATTCTAATTGTACCAAAAGTAACTAAAAGACTTGACAAAAGGAAAGGTGGATATGATTTAATTTGGGAGAGTGATGAGATGTTTACAGGAAAGTCATTTTATCTTCCTGGTTCTGTTGATGTACGAGACAAGCAATTGGAAGACTGGAACTTGAAGCCACCACCTCTCTACCTTTGGAGTCACCCTGATTGGACCAGTTTGCACAGGAAAATTGCTCAAGAACATGGCCACATGAAGGAGGAATATGATGTGCATGTGAAGAATTATCTTATGGAGGAGAATCATGACTGTTACCAGGACTATTCTGGATTACATAAACATGGGGATGTTTTGAGCATATTTGATGATATTCCATGTGATGATGATGATGTTGCAGATGAGGAAGTTGCAACATGCAATGCTCAGGGTCAGGTGAAGGGAACACTGTTTTCTGATTGTGGAGGAGCAATGGAATTGGAGAATAGGTTACCCTTTGATGAAGCTGAGGAAATGTGCATTGATATGGAGTTATCAACTCCCTAG 2838 0.3827 MLEDKNVESKSFGHLMASSDEEGEIIPVVTSYWFENEKEDFVSLCSLTLLFSISEIECDLGEKVFLRGTTGDSLQKIYKQITGWKFELTYEQPEISVLSKDRNWITLQRPRKCFESIIRTILVTVYFLHFLRRNPEESQISIWDKMKKAFSAFDIIPSENDVLNHVSLMREAVKRDKDLTKSKYLLDLMEKGCSNEDFHEYNDEENVQSYELNLVGEQNIGYDTVCSICDNGGEILPCEGSCLRSFHATKEAGIDAFCESLGYTTAQVKAFPNFYCQNCKYKQHQCFACGKLGSSDVSSKAEVFPCVTANCGLYYHPDCVARLLCPGIDTEQDEMRKKVAFGKAFVCPLHTCSLCKKGEVKNVHHLQLAICRRCPKAYHRKCLPKEISFTLDYDKGIEQRAWDGLLDHRILIYCTDHEMDSKLGTPARDHLVFPDIKVKRKSVSFREGDVAKDVEKICCKKDTLFSSASVKFDWYRKYLKVKNMPVSNHSSPSPSKKLPLKGANLSCNSRLCEAKSLQKNLVCARTDKTGFEKPLANKIRTSLDFDNAEMENSVLSLVKESMSTFNEQEFIKSHQAFCSTSGLTETEFHKNLTQGKVEGSIKAVQTALQRLEEGCSIEEAKTICDPVVLHQLFIWQKQIKVYLAPFLHGMRYTSFGRHFTKIDKLKEVVNRLHWYVQNGDTVLDFCCGSNDFSCLMKSKLEQMGKSCSFKNYDLFQPKNDFNFEKRDWMSVNAEELPHGSKLIIGLNPPFGVKGCLANKFINKALTFNPKLLILIVPKVTKRLDKRKGGYDLIWESDEMFTGKSFYLPGSVDVRDKQLEDWNLKPPPLYLWSHPDWTSLHRKIAQEHGHMKEEYDVHVKNYLMEENHDCYQDYSGLHKHGDVLSIFDDIPCDDDDVADEEVATCNAQGQVKGTLFSDCGGAMELENRLPFDEAEEMCIDMELSTP* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0773 945 SMART PHD_3 285 351 IPR001965 -
Vra9g0773 945 SMART PHD_3 225 280 IPR001965 -
Vra9g0773 945 SMART PHD_3 352 418 IPR001965 -
Vra9g0773 945 Pfam Cytosine specific DNA methyltransferase replication foci domain 66 147 IPR022702 -
Vra9g0773 945 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 652 758 IPR029063 -
Vra9g0773 945 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 16 886 - -
Vra9g0773 945 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 282 372 IPR013083 -
Vra9g0773 945 CDD PHD2_NSD 285 350 - -
Vra9g0773 945 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 222 281 IPR013083 -
Vra9g0773 945 ProSiteProfiles Ig-like domain profile. 434 518 IPR007110 -
Vra9g0773 945 PANTHER EDM2-LIKE PROTEIN1 16 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0773 Vra-Chr9 8923299 8934324 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0773 - - cam:101512524 1205.66