Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0738 ATGGCTCATTTGGTTTTCTTTGTTTTGATCTTTGCTGGGCAACTGATTGGTGGATTCAGTGCCCAAAGGCAGCATCCGTCCAACAATGGAAAACTGATAACTATTCTGAGCATTGATGGTGGTGGCATCAAGGCCATTATTCCAGCAACAATTCTTGATTACTTAGACAAGGCTCTTAAGGCTAAGGATCCAAAAGCAGATTTAGCAGATTACTTTGATGTGATAGGAGGAACCAGCACTGGTTCAATCACAGCAGCCATGTTAGCCACCCCAAGCTTTGATCGTCCTACTCGTCCTGCTTATACTGCTGCACAGATACTAGACTTCTATAAACTAAATGGCCCTCGTATATTCAACCAATCTAGACCAGGAAACGGTTCCCTGTTCGATGGAGAGGGCTTACATGAAGCAGCCAGTGATGCGTTGAAGGAAACACGAATTGGTGAAGCATTGACCAATCTCGTAATCCCAGCTTTCGATATCAAGAAACAAAAACCATATGTATTCTCAAGCTACAAGCTTAAGAAGGTTCCCTACTTAAATGCCTTTTTGTCTGATATATGCACATCCAGTTCAACTGCAGCCACTCAGTTCCCACCTTACTTTTTTGAGAATCACGGTGTTGAGTTCAATTTGGTTGATGGTGGTGAAGCAGCTGTGAATCCGACACAAATAGCAGTGAGTGAAGTGCTACAGCAGAATGAGGATCCTGAAATTCTAGTGTTGTCTTTGGGGACTGGAGCAACAAAAATTGAAGAGATTTATGATGCTCGTCTGGCTGGGACATGGTTTACAGAAACATGGGCTGTTATTGATCCGAATTTTCAAGGTCGTGCTTATACAGCAATCACTGAATACTATCTTTCTTCAATATTCTCAGGCTTTCAACCTCGCAATACCTACTTTCGAGTTCAGGAATACGACTTGAATCCTGATTTCTCAAACCCAGTTAATGTTACACAAGAAAACTTGGAAGGCCTGGAGAAGACTGGAAAACAACTGTTAAAGAAAAAAGTTGTGACGTTTAATTTGGATACTTTTGATTTAGAAGAAGACAAGGAAACATATGCTGAAGCTCTTGACAGGATTGCTGATATTTTGCATGGAGAAAGAGAACGTCGTCGGAGAAGCAAATATATGGAAAAAGGAGAAGAAGCGTATTTAATGTCAATTATATGA 1179 0.4105 MAHLVFFVLIFAGQLIGGFSAQRQHPSNNGKLITILSIDGGGIKAIIPATILDYLDKALKAKDPKADLADYFDVIGGTSTGSITAAMLATPSFDRPTRPAYTAAQILDFYKLNGPRIFNQSRPGNGSLFDGEGLHEAASDALKETRIGEALTNLVIPAFDIKKQKPYVFSSYKLKKVPYLNAFLSDICTSSSTAATQFPPYFFENHGVEFNLVDGGEAAVNPTQIAVSEVLQQNEDPEILVLSLGTGATKIEEIYDARLAGTWFTETWAVIDPNFQGRAYTAITEYYLSSIFSGFQPRNTYFRVQEYDLNPDFSNPVNVTQENLEGLEKTGKQLLKKKVVTFNLDTFDLEEDKETYAEALDRIADILHGERERRRRSKYMEKGEEAYLMSII* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0738 392 Gene3D Cytosolic phospholipase A2 catalytic domain 20 380 - -
Vra9g0738 392 Pfam Patatin-like phospholipase 36 226 IPR002641 GO:0006629
Vra9g0738 392 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 227 IPR002641 GO:0006629
Vra9g0738 392 PANTHER PATATIN 3 382 - -
Vra9g0738 392 Coils Coil 317 337 - -
Vra9g0738 392 SUPERFAMILY FabD/lysophospholipase-like 32 346 IPR016035 -
Vra9g0738 392 PANTHER XYLOSE ISOMERASE 3 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0738 Vra-Chr9 8447208 8449313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0738 25 374 Miscellaneous Gene Families AT2G26560 38.860 3.47e-75 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0738 - - vun:114165690 485.723